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fbxl3b F-box and leucine-rich repeat protein 3b [ Danio rerio (zebrafish) ]

Gene ID: 450055, updated on 4-Jan-2025

Summary

Official Symbol
fbxl3bprovided by ZNC
Official Full Name
F-box and leucine-rich repeat protein 3bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-041010-178
See related
AllianceGenome:ZFIN:ZDB-GENE-041010-178
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
wu:fd52d09; zgc:101682
Summary
Orthologous to human FBXL3 (F-box and leucine rich repeat protein 3). [provided by Alliance of Genome Resources, Jan 2025]
Annotation information
Annotation category: partial on reference assembly
Orthologs
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Genomic context

See fbxl3b in Genome Data Viewer
Location:
chromosome: 6
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 6 NC_007117.7 (59935102..59968146, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 6 NC_007117.6 (60003117..60012325, complement)

Chromosome 6 - NC_007117.7Genomic Context describing neighboring genes Neighboring gene angio-associated, migratory cell protein Neighboring gene G-protein coupled bile acid receptor 1 Neighboring gene nuclear FMR1 interacting protein 1 Neighboring gene zgc:65895 Neighboring gene coiled-coil domain containing 122 Neighboring gene mitochondrial translational release factor 1

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
uncharacterized protein LOC450055

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001006075.1NP_001006075.1  uncharacterized protein LOC450055

    See identical proteins and their annotated locations for NP_001006075.1

    Status: PREDICTED

    Source sequence(s)
    BC083245
    UniProtKB/TrEMBL
    Q5XJQ3
    Conserved Domains (1) summary
    pfam12937
    Location:3980
    F-box-like; F-box-like

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007117.7 Reference GRCz11 Primary Assembly

    Range
    59935102..59968146 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)