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tmem144b transmembrane protein 144b [ Danio rerio (zebrafish) ]

Gene ID: 449810, updated on 9-Dec-2024

Summary

Official Symbol
tmem144bprovided by ZNC
Official Full Name
transmembrane protein 144bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-041010-58
See related
Ensembl:ENSDARG00000036247 AllianceGenome:ZFIN:ZDB-GENE-041010-58
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:103560
Summary
Predicted to enable carbohydrate transmembrane transporter activity. Predicted to act upstream of or within carbohydrate transmembrane transport. Predicted to be located in membrane. Orthologous to human TMEM144 (transmembrane protein 144). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See tmem144b in Genome Data Viewer
Location:
chromosome: 14
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 14 NC_007125.7 (35884853..35892713, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 14 NC_007125.6 (35544539..35552399, complement)

Chromosome 14 - NC_007125.7Genomic Context describing neighboring genes Neighboring gene platelet derived growth factor c Neighboring gene glutamate receptor, ionotropic, AMPA 2b Neighboring gene golgi associated kinase 1B Neighboring gene zgc:77938 Neighboring gene alcohol dehydrogenase 5-like

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001005983.1NP_001005983.1  transmembrane protein 144b precursor

    See identical proteins and their annotated locations for NP_001005983.1

    Status: PROVISIONAL

    Source sequence(s)
    BC083426
    UniProtKB/TrEMBL
    Q5XJ79
    Related
    ENSDARP00000052647.4, ENSDART00000052648.5
    Conserved Domains (1) summary
    cl19288
    Location:42379
    TMEM144; Transmembrane family, TMEM144 of transporters

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007125.7 Reference GRCz11 Primary Assembly

    Range
    35884853..35892713 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)