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bet1l Bet1 golgi vesicular membrane trafficking protein-like [ Danio rerio (zebrafish) ]

Gene ID: 445493, updated on 9-Dec-2024

Summary

Official Symbol
bet1lprovided by ZNC
Official Full Name
Bet1 golgi vesicular membrane trafficking protein-likeprovided by ZNC
Primary source
ZFIN:ZDB-GENE-040822-2
See related
Ensembl:ENSDARG00000032037 AllianceGenome:ZFIN:ZDB-GENE-040822-2
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:100789
Summary
Predicted to enable SNAP receptor activity. Predicted to be involved in regulation of retrograde vesicle-mediated transport, Golgi to ER and retrograde transport, endosome to Golgi. Predicted to act upstream of or within protein transport. Predicted to be located in Golgi membrane. Predicted to be part of SNARE complex. Human ortholog(s) of this gene implicated in uterine fibroid. Orthologous to human BET1L (Bet1 golgi vesicular membrane trafficking protein like). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See bet1l in Genome Data Viewer
Location:
chromosome: 25
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 25 NC_007136.7 (7667632..7670642, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 25 NC_007136.6 (7487182..7490120, complement)

Chromosome 25 - NC_007136.7Genomic Context describing neighboring genes Neighboring gene myosin VAb Neighboring gene cAMP-regulated phosphoprotein 19b Neighboring gene potassium inwardly rectifying channel subfamily J member 11, like Neighboring gene CD59 molecule (CD59 blood group) b

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Pathways from PubChem

General gene information

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables SNAP receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within protein transport IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of retrograde vesicle-mediated transport, Golgi to ER IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in retrograde transport, endosome to Golgi IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 
part_of SNARE complex IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
BET1-like protein
Names
blocked early in transport 1 homolog-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001003998.2NP_001003998.1  BET1-like protein

    See identical proteins and their annotated locations for NP_001003998.1

    Status: VALIDATED

    Source sequence(s)
    BX088562
    UniProtKB/Swiss-Prot
    Q68EL3
    Related
    ENSDARP00000113973.1, ENSDART00000142794.3
    Conserved Domains (1) summary
    cd15853
    Location:1775
    SNARE_Bet1; SNARE motif of Bet1

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007136.7 Reference GRCz11 Primary Assembly

    Range
    7667632..7670642 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)