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Rab18 Rab18 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 44360, updated on 4-Jan-2025

Summary

Official Symbol
Rab18provided by FlyBase
Official Full Name
Rab18provided by FlyBase
Primary source
FLYBASE:FBgn0015794
Locus tag
Dmel_CG3129
See related
AllianceGenome:FB:FBgn0015794
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
24639915; AAF46057; CG3129; Dmel\CG3129; DmRab18; DRABR4; DRabRP4; O18337; Rab-r4; Rab-RP4; rab18; Rab18/RP4
Summary
Predicted to enable GTPase activity. Involved in macroautophagy. Located in Golgi apparatus; endoplasmic reticulum; and vacuole. Is expressed in several structures, including adult ensheathing glial cell; brain; imaginal disc; mushroom body; and synaptic neuropil domain. Human ortholog(s) of this gene implicated in Warburg micro syndrome 3. Orthologous to human RAB18 (RAB18, member RAS oncogene family). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See Rab18 in Genome Data Viewer
Location:
5A11-5A11; 1-12 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (5670827..5671812, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (5564860..5565845, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR45520 Neighboring gene Sirtuin 4 Neighboring gene uncharacterized protein Neighboring gene Ribosomal protein L35 Neighboring gene Trapped in endoderm 1

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 
enables GTPase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 
enables GTPase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in Rab protein signal transduction ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in intracellular protein transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in lipid droplet organization IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in macroautophagy IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in vesicle-mediated transport ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
is_active_in Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in Golgi apparatus IDA
Inferred from Direct Assay
more info
PubMed 
located_in autolysosome IDA
Inferred from Direct Assay
more info
PubMed 
located_in autophagosome IDA
Inferred from Direct Assay
more info
PubMed 
located_in early endosome HDA PubMed 
is_active_in endomembrane system IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in endoplasmic reticulum IDA
Inferred from Direct Assay
more info
PubMed 
located_in neuronal cell body HDA PubMed 
located_in vesicle ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
Rab18
Names
CG3129-PA
Rab18-PA
rab-related protein 4

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    5670827..5671812 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_080005.4NP_524744.2  Rab18 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524744.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    O18337, Q9W4A0
    Related
    FBpp0070814
    Conserved Domains (2) summary
    smart00175
    Location:6166
    RAB; Rab subfamily of small GTPases
    cd01863
    Location:6165
    Rab18; Rab GTPase family 18 (Rab18)