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BG642312 BG642312 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 4379909, updated on 9-Dec-2024

Summary

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Official Symbol
BG642312provided by FlyBase
Official Full Name
BG642312provided by FlyBase
Primary source
FLYBASE:FBgn0047334
Locus tag
Dmel_CG33943
See related
AllianceGenome:FB:FBgn0047334
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
4h1; BcDNA:AT24650; BG642312(4h1); CG33943; CR33943; Dmel\CG33943; pncr010:3L
Summary
Involved in regulation of egg-laying behavior. Located in extracellular space. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See BG642312 in Genome Data Viewer
Location:
65A10-65A10; 3-16 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (6232469..6233381, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (6225569..6226481, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A network of interactions among seminal proteins underlies the long-term postmating response in Drosophila. Ram KR, et al. Proc Natl Acad Sci U S A, 2009 Sep 8. PMID 19706411, Free PMC Article
  2. A dual role of lola in Drosophila ovary development: regulating stem cell niche establishment and repressing apoptosis. Zhao T, et al. Cell Death Dis, 2022 Sep 2. PMID 36056003, Free PMC Article
  3. Identification of putative noncoding polyadenylated transcripts in Drosophila melanogaster. Tupy JL, et al. Proc Natl Acad Sci U S A, 2005 Apr 12. PMID 15809421, Free PMC Article
  4. An ectopic expression screen reveals the protective and toxic effects of Drosophila seminal fluid proteins. Mueller JL, et al. Genetics, 2007 Feb. PMID 17110486, Free PMC Article
  5. Sustained post-mating response in Drosophila melanogaster requires multiple seminal fluid proteins. Ram KR, et al. PLoS Genet, 2007 Dec. PMID 18085830, Free PMC Article

See all (27) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in regulation of egg-laying behavior IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in sexual reproduction HEP PubMed 
Component Evidence Code Pubs
located_in extracellular space HDA PubMed 
located_in extracellular space ISM
Inferred from Sequence Model
more info
 PubMed 

General protein information

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Preferred Names
BG642312
Names
BG642312-PA
BG642312-PB
CG33943-PA
CG33943-PB
putative noncoding RNA 010:3L

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    6232469..6233381 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001202123.1 → NP_001189052.1  BG642312, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001189052.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q0E8H8, Q8T964
    Conserved Domains (1) summary
    TIGR03700
    Location:30 → 62
    mena_SCO4494; putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family

  2. NM_001043122.2 → NP_001036587.1  BG642312, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001036587.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q0E8H8, Q8T964
    Conserved Domains (1) summary
    TIGR03700
    Location:30 → 62
    mena_SCO4494; putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q0E8H8 Q0E8H8

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