znf106a zinc finger protein 106a [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: znf106aprovided by ZNC
Official Full Name: zinc finger protein 106aprovided by ZNC
Primary source: ZFIN:ZDB-GENE-040718-21
See related: Ensembl:ENSDARG00000016651 AllianceGenome:ZFIN:ZDB-GENE-040718-21
Gene type: protein coding
RefSeq status: MODEL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zfp106; znf106; id:ibd3322; zgc:100799; si:ch211-283f6.8
Summary: Predicted to enable RNA binding activity. Predicted to be involved in insulin receptor signaling pathway. Predicted to be active in cytosol and membrane. Is expressed in somite. Orthologous to human ZNF106 (zinc finger protein 106). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 17

Exon count:: 22

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	17	NC_007128.7 (45347731..45378475, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	17	NC_007128.6 (45364479..45395227, complement)

Chromosome 17 - NC_007128.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fa96b12.y1 (e-PCR)
- UniSTS:189719

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables RNA binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in insulin receptor signaling pathway	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cytosol	IBA Inferred from Biological aspect of Ancestor more info
is_active_in membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: zinc finger protein 106

Names: zinc finger protein 106 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

NC_007128.7 Reference GRCz11 Primary Assembly

Range

45347731..45378475 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_003200378.5 → XP_003200426.2 zinc finger protein 106

UniProtKB/TrEMBL

A0A8M1RMN3, F1QEA7, F1QN33

Related

ENSDARP00000117899.2, ENSDART00000132969.4

Conserved Domains (4) summary

COG2319
Location:1279 → 1569

WD40; WD40 repeat [General function prediction only]

cd00200
Location:1280 → 1556

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

sd00020
Location:7 → 29

ZF_C2H2; C2H2 Zn finger [structural motif]

sd00039
Location:1328 → 1374

7WD40; WD40 repeat [structural motif]

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

NM_001002732.1: Suppressed sequence

Description

NM_001002732.1: This RefSeq was suppressed temporarily based on the calculation that the encoded protein was shorter than proteins from the putative ortholog from human: ZFP106 (GeneID:64397).