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timm13 translocase of inner mitochondrial membrane 13 homolog (yeast) [ Danio rerio (zebrafish) ]

Gene ID: 436738, updated on 4-Jan-2025

Summary

Official Symbol
timm13provided by ZNC
Official Full Name
translocase of inner mitochondrial membrane 13 homolog (yeast)provided by ZNC
Primary source
ZFIN:ZDB-GENE-040718-167
See related
Ensembl:ENSDARG00000058297 AllianceGenome:ZFIN:ZDB-GENE-040718-167
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fd44h11; zgc:92895; wu:fd44h11
Summary
Predicted to enable metal ion binding activity. Predicted to be involved in protein insertion into mitochondrial inner membrane. Predicted to act upstream of or within protein transport. Predicted to be located in mitochondrial inner membrane. Predicted to be part of mitochondrial intermembrane space protein transporter complex. Is expressed in several structures, including eye; immature eye; midbrain; myotome; and pectoral fin. Orthologous to human TIMM13 (translocase of inner mitochondrial membrane 13). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See timm13 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (10771114..10774749, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (10741432..10745067, complement)

Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene SAS-6 centriolar assembly protein Neighboring gene transmembrane serine protease 9 Neighboring gene LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated Neighboring gene ectodermal-neural cortex 3 Neighboring gene rho/rac guanine nucleotide exchange factor (GEF) 18b

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in protein insertion into mitochondrial inner membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within protein transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 
part_of mitochondrial intermembrane space protein transporter complex IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
mitochondrial import inner membrane translocase subunit Tim13

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001002465.2NP_001002465.1  mitochondrial import inner membrane translocase subunit Tim13

    See identical proteins and their annotated locations for NP_001002465.1

    Status: VALIDATED

    Source sequence(s)
    BX908398, EH499699
    UniProtKB/Swiss-Prot
    Q6DGJ3
    UniProtKB/TrEMBL
    B2GSH6
    Related
    ENSDARP00000075599.5, ENSDART00000081156.6
    Conserved Domains (1) summary
    pfam02953
    Location:2484
    zf-Tim10_DDP; Tim10/DDP family zinc finger

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007133.7 Reference GRCz11 Primary Assembly

    Range
    10771114..10774749 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)