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pals-11 Protein containing ALS2cr12 (ALS2CR12) signature [ Caenorhabditis elegans ]

Gene ID: 4363012, updated on 18-Sep-2024

Summary

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Official Symbol
pals-11
Official Full Name
Protein containing ALS2cr12 (ALS2CR12) signature
Primary source
WormBase:WBGene00044708
Locus tag
CELE_C17H1.13
See related
AllianceGenome:WB:WBGene00044708
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See pals-11 in Genome Data Viewer
Location:
chromosome: I
Exon count:
4
Sequence:
Chromosome: I; NC_003279.8 (13124168..13126650, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Protein containing ALS2cr12 (ALS2CR12) signature Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene Protein containing ALS2cr12 (ALS2CR12) signature

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Reference quantitative transcriptome dataset for adult Caenorhabditis elegans. Piovesan A, et al. Data Brief, 2019 Aug. PMID 31440537, Free PMC Article
  2. The purine nucleoside phosphorylase pnp-1 regulates epithelial cell resistance to infection in C. elegans. Tecle E, et al. PLoS Pathog, 2021 Apr. PMID 33878133, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

General protein information

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Preferred Names
Protein containing ALS2cr12 (ALS2CR12) signature
NP_001040636.1
  • Product from WormBase gene class pals;
    Partially confirmed by transcript evidence
NP_001293379.1
  • Product from WormBase gene class pals;
    Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    13124168..13126650 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001047171.5 → NP_001040636.1  Protein containing ALS2cr12 (ALS2CR12) signature [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001040636.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q2L6U4
    Conserved Domains (1) summary
    pfam09726
    Location:15 → 114
    Macoilin; Transmembrane protein

  2. NM_001306450.3 → NP_001293379.1  Protein containing ALS2cr12 (ALS2CR12) signature [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293379.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A078BQI6
    Conserved Domains (1) summary
    pfam09726
    Location:48 → 147
    Macoilin; Transmembrane protein
Nucleotide Protein
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