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RpS28a Ribosomal protein S28a [ Drosophila melanogaster (fruit fly) ]

Gene ID: 43564, updated on 9-Dec-2024

Summary

Official Symbol
RpS28aprovided by FlyBase
Official Full Name
Ribosomal protein S28aprovided by FlyBase
Primary source
FLYBASE:FBgn0039739
Locus tag
Dmel_CG15527
See related
AllianceGenome:FB:FBgn0039739
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG15527; Dmel\CG15527
Summary
Predicted to be a structural constituent of ribosome. Involved in wing disc development. Predicted to be located in ribosome. Predicted to be part of cytosolic small ribosomal subunit. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 15 with mandibulofacial dysostosis. Orthologous to human RPS28 (ribosomal protein S28). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See RpS28a in Genome Data Viewer
Location:
99D2-99D2; 3-100 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (30022345..30022648, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (25848067..25848370, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase Neighboring gene long non-coding RNA:CR46111 Neighboring gene Axin Neighboring gene antisense RNA:CR44045

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
enables structural constituent of ribosome ISS
Inferred from Sequence or Structural Similarity
more info
 
enables structural constituent of ribosome TAS
Traceable Author Statement
more info
PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic translation IC
Inferred by Curator
more info
 
involved_in cytoplasmic translation TAS
Traceable Author Statement
more info
PubMed 
involved_in maturation of SSU-rRNA IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in ribosomal small subunit assembly IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 
involved_in wing disc development IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of cytosolic small ribosomal subunit ISS
Inferred from Sequence or Structural Similarity
more info
 
part_of cytosolic small ribosomal subunit TAS
Traceable Author Statement
more info
PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
ribosomal protein S28a
Names
CG15527-PA
RpS28a-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    30022345..30022648 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_143507.2NP_651764.1  ribosomal protein S28a [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_651764.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    C9QPF8, Q9VAB9
    Related
    FBpp0084966
    Conserved Domains (1) summary
    cd04457
    Location:564
    S1_S28E; S1_S28E: S28E, S1-like RNA-binding domain. S1-like RNA-binding domains are found in a wide variety of RNA-associated proteins. S28E protein is a component of the 30S ribosomal subunit. S28E is highly conserved among archaea and eukaryotes. S28E may ...