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Gm20747 predicted gene, 20747 [ Mus musculus (house mouse) ]

Gene ID: 434960, updated on 27-Nov-2024

Summary

Official Symbol
Gm20747provided by MGI
Official Full Name
predicted gene, 20747provided by MGI
Primary source
MGI:MGI:5434103
See related
Ensembl:ENSMUSG00000094729 AllianceGenome:MGI:5434103
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Predicted to enable methylated histone binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be active in cytosol and nucleoplasm. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See Gm20747 in Genome Data Viewer
Location:
Y; Y C1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) Y NC_000087.8 (53412536..53414886, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) Y NC_000087.7 (53415957..53418307, complement)

Chromosome Y - NC_000087.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 21275 Neighboring gene predicted gene, 21285 Neighboring gene predicted gene, 20929 Neighboring gene vomeronasal 2, receptor, pseudogene 150

Genomic regions, transcripts, and products

General gene information

Markers

Clone Names

  • MGC107173

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables methylated histone binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in nucleoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001025241.3NP_001020412.1  Ssty2 family member

    See identical proteins and their annotated locations for NP_001020412.1

    Status: VALIDATED

    Source sequence(s)
    AC147606
    Consensus CDS
    CCDS85884.1
    UniProtKB/TrEMBL
    Q5FWB5, Q62456
    Related
    ENSMUSP00000139491.2, ENSMUST00000187856.2
    Conserved Domains (1) summary
    pfam02513
    Location:2169
    Spin-Ssty; Spin/Ssty Family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000087.8 Reference GRCm39 C57BL/6J

    Range
    53412536..53414886 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)