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Gm5591 predicted gene 5591 [ Mus musculus (house mouse) ]

Gene ID: 434171, updated on 9-Dec-2024

Summary

Official Symbol
Gm5591provided by MGI
Official Full Name
predicted gene 5591provided by MGI
Primary source
MGI:MGI:3648692
See related
Ensembl:ENSMUSG00000060565 AllianceGenome:MGI:3648692
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG434171
Summary
Orthologous to human C2orf78 (chromosome 2 open reading frame 78). [provided by Alliance of Genome Resources, Dec 2024]
Expression
Restricted expression toward testis adult (RPKM 6.8) See more
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Genomic context

See Gm5591 in Genome Data Viewer
Location:
7 B3; 7 25.36 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (38217563..38227617, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (38518139..38528193, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_18695 Neighboring gene predicted gene 6605 Neighboring gene predicted gene 6819 Neighboring gene predicted gene 29087 Neighboring gene predicted gene 4454

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC434171

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001013810.2NP_001013832.1  uncharacterized protein LOC434171

    See identical proteins and their annotated locations for NP_001013832.1

    Status: PREDICTED

    Source sequence(s)
    AK029937
    Consensus CDS
    CCDS52205.1
    UniProtKB/TrEMBL
    Q8CDK1
    Related
    ENSMUSP00000078695.6, ENSMUST00000079759.6
    Conserved Domains (1) summary
    pfam15442
    Location:437581
    DUF4629; Domain of unknown function (DUF4629)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    38217563..38227617 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)