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CG5071 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 43090, updated on 9-Dec-2024

Summary

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Official Symbol
CG5071provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0039347
Locus tag
Dmel_CG5071
See related
AllianceGenome:FB:FBgn0039347
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:AT31683; Dmel\CG5071
Summary
Predicted to enable cyclosporin A binding activity; peptidyl-prolyl cis-trans isomerase activity; and zinc ion binding activity. Predicted to be involved in protein folding. Predicted to be active in cytoplasm. Is expressed in spermatozoon. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG5071 in Genome Data Viewer
Location:
96E5-96E5; 3-88 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (25618414..25621838)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (21444136..21446401)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene musashi Neighboring gene yellow-emperor Neighboring gene uncharacterized protein Neighboring gene Nuclear protein localization 4 Neighboring gene Succinic semialdehyde dehydrogenase Neighboring gene jing interacting gene regulatory 1 Neighboring gene mir-92a stem loop

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Segmental duplication, microinversion, and gene loss associated with a complex inversion breakpoint region in Drosophila. Calvete O, et al. Mol Biol Evol, 2012 Jul. PMID 22328714, Free PMC Article
  2. Genomic analysis of the TRIM family reveals two groups of genes with distinct evolutionary properties. Sardiello M, et al. BMC Evol Biol, 2008 Aug 1. PMID 18673550, Free PMC Article
  3. Comprehensively surveying structure and function of RING domains from Drosophila melanogaster. Ying M, et al. PLoS One, 2011. PMID 21912646, Free PMC Article
  4. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article
  5. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article

See all (19) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables cyclosporin A binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables peptidyl-prolyl cis-trans isomerase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables peptidyl-prolyl cis-trans isomerase activity IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding ISM
Inferred from Sequence Model
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in protein peptidyl-prolyl isomerization IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG5071-PA
CG5071-PB
CG5071-PC
CG5071-PD
NP_001247305.1
NP_001303432.1
NP_651406.1
NP_733111.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    25618414..25621838
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001316503.1 → NP_001303432.1  uncharacterized protein Dmel_CG5071, isoform D [Drosophila melanogaster]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8IMS5
    Conserved Domains (2) summary
    cd00162
    Location:16 → 59
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
    cl00197
    Location:514 → 674
    cyclophilin; cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic, bacterial and archeal proteins which exhibit a peptidylprolyl cis- trans isomerases activity (PPIase, Rotamase) and in addition bind the ...

  2. NM_143149.2 → NP_651406.1  uncharacterized protein Dmel_CG5071, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_651406.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8IMS5
    Related
    FBpp0084258
    Conserved Domains (2) summary
    cd00162
    Location:16 → 59
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
    cl00197
    Location:514 → 674
    cyclophilin; cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic, bacterial and archeal proteins which exhibit a peptidylprolyl cis- trans isomerases activity (PPIase, Rotamase) and in addition bind the ...

  3. NM_170232.2 → NP_733111.1  uncharacterized protein Dmel_CG5071, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_733111.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B6IDI3, Q9VBP7
    Related
    FBpp0084259
    Conserved Domains (1) summary
    cd00162
    Location:16 → 59
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...

  4. NM_001260376.1 → NP_001247305.1  uncharacterized protein Dmel_CG5071, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001247305.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0B4K7U6, B6IDI3
    Conserved Domains (1) summary
    cd00162
    Location:16 → 59
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A0B4K7U6 A0A0B4K7U6
Q5BHU6 Q5BHU6
Q8IH80 Q8IH80
Q8IMS5 Q8IMS5
Q8T8Y0 Q8T8Y0
Q9VBP7 Q9VBP7

Gene LinkOut

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