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CG5079 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 43089, updated on 18-Sep-2024

Summary

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Official Symbol
CG5079provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0039346
Locus tag
Dmel_CG5079
See related
AllianceGenome:FB:FBgn0039346
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG5079
Orthologs
all
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Genomic context

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See CG5079 in Genome Data Viewer
Location:
96E4-96E5; 3-88 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (25613666..25614451)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (21439527..21440040)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene musashi Neighboring gene long non-coding RNA:CR45910 Neighboring gene mir-1000 stem loop Neighboring gene yellow-emperor Neighboring gene Nuclear protein localization 4 Neighboring gene uncharacterized protein Neighboring gene Succinic semialdehyde dehydrogenase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Segmental duplication, microinversion, and gene loss associated with a complex inversion breakpoint region in Drosophila. Calvete O, et al. Mol Biol Evol, 2012 Jul. PMID 22328714, Free PMC Article
  2. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
  3. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
  4. The Release 6 reference sequence of the Drosophila melanogaster genome. Hoskins RA, et al. Genome Res, 2015 Mar. PMID 25589440, Free PMC Article
  5. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867, Free PMC Article

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG5079-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    25613666..25614451
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_143148.2 → NP_651405.1  uncharacterized protein Dmel_CG5079 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_651405.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q4V4Z8, Q4V5C3, Q9VBP8
    Related
    FBpp0084257
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VBP8 Q9VBP8

Gene LinkOut

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