SCN11A sodium voltage-gated channel alpha subunit 11 [Gallus gallus (chicken)] - Gene

Summary

Symbol: SCN11Aprovided by CGNC
Full Name: sodium voltage-gated channel alpha subunit 11provided by CGNC
Primary source: CGNC:53357
See related: Ensembl:ENSGALG00010026737
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
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Genomic context

Location:: chromosome: 2

Exon count:: 30

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	2	NC_052533.1 (5314237..5364325)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	2	NC_052574.1 (5316920..5367008)

Chromosome 2 - NC_052533.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables voltage-gated sodium channel activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in membrane depolarization during action potential	IEA Inferred from Electronic Annotation more info	PubMed
involved_in neuronal action potential	IEA Inferred from Electronic Annotation more info	PubMed
involved_in sodium ion transmembrane transport	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in axon	IEA Inferred from Electronic Annotation more info	PubMed
located_in plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed
part_of voltage-gated sodium channel complex	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: sodium voltage-gated channel alpha subunit 11

Names: voltage-dependent sodium channel SCN11A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001318428.3 → NP_001305357.3 sodium voltage-gated channel alpha subunit 11

Status: VALIDATED

Source sequence(s)

JAENSK010000035

UniProtKB/TrEMBL

F9W2X9

Related

ENSGALP00010039646.1, ENSGALT00010064876.1

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

5314237..5364325

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_046925820.1 → XP_046781776.1 sodium voltage-gated channel alpha subunit 11 isoform X2

UniProtKB/TrEMBL

F9W2X9
XM_040685952.1 → XP_040541886.1 sodium voltage-gated channel alpha subunit 11 isoform X1

UniProtKB/TrEMBL

A0A8V1A6D1, F9W2X9

Conserved Domains (2) summary

PLN03223
Location:1292 → 1477

PLN03223; Polycystin cation channel protein; Provisional

cd13433
Location:1158 → 1209

Na_channel_gate; Inactivation gate of the voltage-gated sodium channel alpha subunits