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VhaAC39-2 Vacuolar H[+] ATPase AC39 subunit 2 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 42739, updated on 4-Jan-2025

Summary

Official Symbol
VhaAC39-2provided by FlyBase
Official Full Name
Vacuolar H[+] ATPase AC39 subunit 2provided by FlyBase
Primary source
FLYBASE:FBgn0039058
Locus tag
Dmel_CG4624
See related
AllianceGenome:FB:FBgn0039058
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-WO0118547.227; CG4624; Dmel\CG4624; V0d; vhaAC39-2
Summary
Predicted to contribute to proton-transporting ATPase activity, rotational mechanism. Involved in terminal branching, open tracheal system. Predicted to be part of plasma membrane proton-transporting V-type ATPase complex and vacuolar proton-transporting V-type ATPase complex. Predicted to be active in early endosome. Is expressed in adult head. Orthologous to human ATP6V0D1 (ATPase H+ transporting V0 subunit d1) and ATP6V0D2 (ATPase H+ transporting V0 subunit d2). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See VhaAC39-2 in Genome Data Viewer
Location:
94E2-94E2; 3-78 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (23158017..23159316, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (18983739..18985038, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene hedgehog Neighboring gene unkempt Neighboring gene uncharacterized protein Neighboring gene Inwardly rectifying potassium channel 1 Neighboring gene uncharacterized protein Neighboring gene cap-n-collar

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 
contributes_to proton-transporting ATPase activity, rotational mechanism ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in proton transmembrane transport IC
Inferred by Curator
more info
 
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
involved_in terminal branching, open tracheal system IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in vacuolar acidification IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in vacuolar transport IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in early endosome IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of plasma membrane proton-transporting V-type ATPase complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of proton-transporting V-type ATPase complex ISS
Inferred from Sequence or Structural Similarity
more info
 
part_of proton-transporting V-type ATPase, V0 domain IEA
Inferred from Electronic Annotation
more info
 
part_of vacuolar proton-transporting V-type ATPase complex IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
vacuolar H[+] ATPase AC39 subunit 2
Names
CG4624-PA
VhaAC39-2-PA
vacuolar H[+] ATPase subunit AC39-2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    23158017..23159316 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_142871.1NP_651128.1  vacuolar H[+] ATPase AC39 subunit 2 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_651128.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    C0PUW1, Q8MST4, Q9VCQ3
    Related
    FBpp0083793, FBtr0084401
    Conserved Domains (2) summary
    COG1527
    Location:1347
    NtpC; Archaeal/vacuolar-type H+-ATPase subunit C/Vma6 [Energy production and conversion]
    pfam01992
    Location:12342
    vATP-synt_AC39; ATP synthase (C/AC39) subunit