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CG6985 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 42694, updated on 9-Dec-2024

Summary

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Official Symbol
CG6985provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0039017
Locus tag
Dmel_CG6985
See related
AllianceGenome:FB:FBgn0039017
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG6985
Summary
Predicted to enable DNA translocase activity. Predicted to be involved in double-strand break repair via homologous recombination and reciprocal meiotic recombination. Predicted to be active in nucleus. Is expressed in organism. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG6985 in Genome Data Viewer
Location:
94C4-94C4; 3-76 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (22741150..22743081)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (18566872..18568803)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Tak1-like 2 Neighboring gene Dicer-1 Neighboring gene vreteno Neighboring gene uncharacterized protein Neighboring gene Heterochromatin Protein 1c Neighboring gene uncharacterized protein Neighboring gene rumi

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of Drosophila segmentation network identifies a JNK pathway factor overexpressed in kidney cancer. Liu J, et al. Science, 2009 Feb 27. PMID 19164706, Free PMC Article
  2. A systematic analysis of Drosophila TUDOR domain-containing proteins identifies Vreteno and the Tdrd12 family as essential primary piRNA pathway factors. Handler D, et al. EMBO J, 2011 Aug 23. PMID 21863019, Free PMC Article
  3. Slowed aging during reproductive dormancy is reflected in genome-wide transcriptome changes in Drosophila melanogaster. Kučerová L, et al. BMC Genomics, 2016 Jan 13. PMID 26758761, Free PMC Article
  4. A Drosophila protein-interaction map centered on cell-cycle regulators. Stanyon CA, et al. Genome Biol, 2004. PMID 15575970, Free PMC Article
  5. Latitudinal clines in gene expression and cis-regulatory element variation in Drosophila melanogaster. Juneja P, et al. BMC Genomics, 2016 Nov 28. PMID 27894253, Free PMC Article

See all (26) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables DNA translocase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in reciprocal meiotic recombination IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG6985-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    22741150..22743081
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_142834.3 → NP_651091.1  uncharacterized protein Dmel_CG6985 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_651091.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8T0A5, Q9VCU8
    Related
    FBpp0083701
    Conserved Domains (1) summary
    pfam10382
    Location:60 → 128
    DUF2439; Protein of unknown function (DUF2439)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VCU8 Q9VCU8

Gene LinkOut

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