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Surf6 Surfeit 6 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 42370, updated on 9-Dec-2024

Summary

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Official Symbol
Surf6provided by FlyBase
Official Full Name
Surfeit 6provided by FlyBase
Primary source
FLYBASE:FBgn0038746
Locus tag
Dmel_CG4510
See related
AllianceGenome:FB:FBgn0038746
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG4510; Dmel\CG4510
Summary
Predicted to enable DNA binding activity and RNA binding activity. Involved in ventral cord development. Predicted to be active in nucleolus. Orthologous to human SURF6 (surfeit 6). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See Surf6 in Genome Data Viewer
Location:
92B6-92B6; 3-67 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (19903665..19904868, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (15729387..15730590, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene neither inactivation nor afterpotential E Neighboring gene uncharacterized protein Neighboring gene Caseinolytic protease chaperone subunit Neighboring gene Rho GTPase activating protein at 92B Neighboring gene long non-coding RNA:CR45047 Neighboring gene long non-coding RNA:CR45048

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables nucleic acid binding ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in ribosomal large subunit biogenesis IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in ribosomal small subunit biogenesis IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in ribosome biogenesis ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in ventral cord development HMP PubMed 
Component Evidence Code Pubs
is_active_in nucleolus IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in nucleolus ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
surfeit 6
Names
CG4510-PA
Surf6-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    19903665..19904868 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_079684.4 → NP_524408.1  surfeit 6 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524408.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8MQW1, Q9VDS6
    Related
    FBpp0083263
    Conserved Domains (1) summary
    pfam04935
    Location:179 → 318
    SURF6; Surfeit locus protein 6
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VDS6.1 Q9VDS6

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Chemical Information
Molecular Biology Databases
Research Materials
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