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sqz squeeze [ Drosophila melanogaster (fruit fly) ]

Gene ID: 42300, updated on 4-Jan-2025

Summary

Official Symbol
sqzprovided by FlyBase
Official Full Name
squeezeprovided by FlyBase
Primary source
FLYBASE:FBgn0010768
Locus tag
Dmel_CG5557
See related
AllianceGenome:FB:FBgn0010768
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-WO0118547.697; CG5557; Dmel\CG5557; l(3)02102; Sqz; SQZ
Summary
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in dendrite guidance and neuroblast development. Is expressed in several structures, including Leucokinin neurons; anterior-posterior subdivision of organism; apterous-expressing neuron of the lateral cluster of the thorax; central nervous system; and ganglia. Orthologous to human ZNF362 (zinc finger protein 362) and ZNF384 (zinc finger protein 384). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See sqz in Genome Data Viewer
Location:
91F4-91F4; 3-66 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (19164211..19170576)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (14989933..14996298)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene nanos Neighboring gene Nop2/Sun-like domain containing protein 5 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
squeeze
Names
CG5557-PA
sqz-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    19164211..19170576
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_079679.3NP_524403.1  squeeze [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524403.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8MT44, Q9U9A8, Q9VDZ3
    UniProtKB/TrEMBL
    U3PU53
    Related
    FBpp0083147
    Conserved Domains (4) summary
    sd00017
    Location:160180
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:186208
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:200227
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:191271
    zf-C2H2_8; C2H2-type zinc ribbon