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cdm cadmus [ Drosophila melanogaster (fruit fly) ]

Gene ID: 42171, updated on 9-Dec-2024

Summary

Official Symbol
cdmprovided by FlyBase
Official Full Name
cadmusprovided by FlyBase
Primary source
FLYBASE:FBgn0261532
Locus tag
Dmel_CG7212
See related
AllianceGenome:FB:FBgn0261532
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
3R23; Cdm; CG 7212; CG7212; Dmel\CG7212; imp13; Imp13; sd-5
Summary
Predicted to enable small GTPase binding activity. Involved in modulation of chemical synaptic transmission; neuron-neuron synaptic transmission; and phototaxis. Predicted to be active in cytoplasm. Is expressed in larval brain; larval somatic muscle cell; larval ventral nerve cord; organism; and spermatozoon. Orthologous to human IPO13 (importin 13). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See cdm in Genome Data Viewer
Location:
90F5-90F5; 3-62 cM
Exon count:
8
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (18179275..18183479, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (14004997..14009201, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene cap binding protein 20 Neighboring gene uncharacterized protein Neighboring gene Peroxiredoxin 5 Neighboring gene well-rounded Neighboring gene uncharacterized protein Neighboring gene Actin-related protein 5 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 
involved_in modulation of chemical synaptic transmission IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in neuron-neuron synaptic transmission IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in phototaxis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in protein import into nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
cadmus
Names
CG7212-PA
CG7212-PB
cdm-PA
cdm-PB
complementation group 5
importin 13
importin-13
sd-5

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    18179275..18183479 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001275767.1NP_001262696.1  cadmus, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001262696.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VEC5
    Conserved Domains (4) summary
    smart00913
    Location:2993
    IBN_N; Importin-beta N-terminal domain
    pfam08389
    Location:98217
    Xpo1; Exportin 1-like protein
    pfam18773
    Location:418454
    Importin_rep; Importin 13 repeat
    pfam18806
    Location:838912
    Importin_rep_3; Importin 13 repeat
  2. NM_142425.3NP_650682.1  cadmus, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_650682.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VEC5
    Related
    FBpp0083039
    Conserved Domains (4) summary
    smart00913
    Location:2993
    IBN_N; Importin-beta N-terminal domain
    pfam08389
    Location:98217
    Xpo1; Exportin 1-like protein
    pfam18773
    Location:418454
    Importin_rep; Importin 13 repeat
    pfam18806
    Location:838912
    Importin_rep_3; Importin 13 repeat