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RT1-T24-2 RT1 class I, locus T24, gene 2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 415057, updated on 17-Aug-2024

Summary

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Official Symbol
RT1-T24-2provided by RGD
Official Full Name
RT1 class I, locus T24, gene 2provided by RGD
Primary source
RGD:1303033
See related
AllianceGenome:RGD:1303033
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
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Genomic context

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See RT1-T24-2 in Genome Data Viewer
Location:
20p12
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 20 NC_086038.1 (2739226..2743710, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 20 NC_051355.1 (2734415..2738899, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 20 NC_005119.4 (3242492..3246976, complement)

Chromosome 20 - NC_086038.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134483846 Neighboring gene RT1 class I, locus T24, gene 4 Neighboring gene uncharacterized LOC120098968 Neighboring gene ribosomal protein L41, pseudogene 1 Neighboring gene RT1 class I, locus T24, gene 3 Neighboring gene class I gene fragment 2331 Neighboring gene class I gene fragment 2310 Neighboring gene uncharacterized LOC134483847

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genomic sequence and comparative analysis of the rat major histocompatibility complex. Hurt P, et al. Genome Res, 2004 Apr. PMID 15060004, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Other Names

  • RT1 class I, T24, gene 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002151.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    BX883048

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086038.1 Reference GRCr8

    Range
    2739226..2743710 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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