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scpr-C SCP-containing protein C [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41348, updated on 4-Jan-2025

Summary

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Official Symbol
scpr-Cprovided by FlyBase
Official Full Name
SCP-containing protein Cprovided by FlyBase
Primary source
FLYBASE:FBgn0037879
Locus tag
Dmel_CG5106
See related
AllianceGenome:FB:FBgn0037879
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BEST:CK01680; cg5106; CG5106; Dmel\CG5106; scp-C; Scpr-C; SCPR-C
Summary
Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in adult head. Orthologous to human R3HDML (R3H domain containing like) and PI15 (peptidase inhibitor 15). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

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See scpr-C in Genome Data Viewer
Location:
86D8-86D8; 3-50 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (11225520..11226681)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (7051242..7052403)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Ribosomal protein L3 Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene GRIP and coiled-coil domain containing 88 kDa Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic imprinting absent in Drosophila melanogaster adult females. Coolon JD, et al. Cell Rep, 2012 Jul 26. PMID 22840398, Free PMC Article
  2. Human BOULE gene rescues meiotic defects in infertile flies. Xu EY, et al. Hum Mol Genet, 2003 Jan 15. PMID 12499397
  3. Molecular evolution and population genetic analysis of candidate female reproductive genes in Drosophila. Panhuis TM, et al. Genetics, 2006 Aug. PMID 16783023, Free PMC Article
  4. Population genomics: whole-genome analysis of polymorphism and divergence in Drosophila simulans. Begun DJ, et al. PLoS Biol, 2007 Nov 6. PMID 17988176, Free PMC Article
  5. Protease gene duplication and proteolytic activity in Drosophila female reproductive tracts. Kelleher ES, et al. Mol Biol Evol, 2009 Sep. PMID 19546158, Free PMC Article

See all (32) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
involved_in multicellular organismal reproductive process IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
 PubMed 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
SCP-containing protein C
Names
CG5106-PA
CG5106-PB
SCP-Related-C
scpr-C-PA
scpr-C-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    11225520..11226681
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001300353.1 → NP_001287282.1  SCP-containing protein C, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001287282.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q0GTC5, Q8T3W8, Q9VGR3
    Conserved Domains (1) summary
    cd05380
    Location:58 → 210
    SCP_euk; SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes. This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed ...

  2. NM_141796.2 → NP_650053.1  SCP-containing protein C, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_650053.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q0GTC5, Q8T3W8, Q9VGR3
    Related
    FBpp0081827
    Conserved Domains (1) summary
    cd05380
    Location:58 → 210
    SCP_euk; SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes. This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8T3W8 Q8T3W8

Gene LinkOut

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