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Cap-H2 Chromosome associated protein H2 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41289, updated on 9-Dec-2024

Summary

Official Symbol
Cap-H2provided by FlyBase
Official Full Name
Chromosome associated protein H2provided by FlyBase
Primary source
FLYBASE:FBgn0037831
Locus tag
Dmel_CG14685
See related
AllianceGenome:FB:FBgn0037831
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
cap-H2; CAP-H2; CapH2; CAPH2; CG14685; dCap-H2; Dmel\CG14685
Summary
Enables chromatin binding activity. Involved in several processes, including chromatin organization; chromosome separation; and male meiosis chromosome segregation. Predicted to be part of condensin complex. Predicted to be active in nucleus. Is expressed in nurse cell. Orthologous to human NCAPH2 (non-SMC condensin II complex subunit H2). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See Cap-H2 in Genome Data Viewer
Location:
86C5-86C6; 3-50 cM
Exon count:
9
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (10761310..10766756)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (6587032..6592478)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR45015 Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR45016 Neighboring gene Mediator complex subunit 7 Neighboring gene Transcription factor TFIIFbeta Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene fau Neighboring gene Desiccate

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables chromatin binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables chromatin binding IDA
Inferred from Direct Assay
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in chromatin organization IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in chromatin organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in chromosome condensation IEA
Inferred from Electronic Annotation
more info
 
involved_in chromosome organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in chromosome separation IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in chromosome separation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in male meiosis chromosome segregation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in meiotic chromosome condensation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in mitotic sister chromatid separation IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
part_of condensin complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of condensin complex ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
chromosome associated protein H2
Names
CG14685-PD
CG14685-PE
CG14685-PF
CG14685-PG
Cap-H2-PD
Cap-H2-PE
Cap-H2-PF
Cap-H2-PG
dCap-H2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    10761310..10766756
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_141757.2NP_650014.2  chromosome associated protein H2, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_650014.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    C7LAG0, Q8INL2
    Conserved Domains (1) summary
    pfam16858
    Location:769844
    CNDH2_C; Condensin II complex subunit CAP-H2 or CNDH2, C-term
  2. NM_169359.2NP_731503.2  chromosome associated protein H2, isoform G [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_731503.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0C4DHE3, C7LAG0
    Conserved Domains (1) summary
    pfam16858
    Location:768843
    CNDH2_C; Condensin II complex subunit CAP-H2 or CNDH2, C-term
  3. NM_169358.2NP_731502.2  chromosome associated protein H2, isoform F [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_731502.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    C7LAG0, Q9VGX5
    Conserved Domains (1) summary
    pfam16858
    Location:756831
    CNDH2_C; Condensin II complex subunit CAP-H2 or CNDH2, C-term
  4. NM_206471.2NP_996193.1  chromosome associated protein H2, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_996193.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7YU87, Q8IHA6
    Conserved Domains (1) summary
    pfam16858
    Location:578653
    CNDH2_C; Condensin II complex subunit CAP-H2 or CNDH2, C-term