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CG31278 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41282, updated on 9-Dec-2024

Summary

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Official Symbol
CG31278provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0051278
Locus tag
Dmel_CG31278
See related
AllianceGenome:FB:FBgn0051278
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG6482; Dmel\CG31278; PDF
Summary
Predicted to enable peptide deformylase activity. Predicted to be involved in N-terminal protein amino acid modification; co-translational protein modification; and peptidyl-methionine modification. Predicted to be active in mitochondrion. Orthologous to human PDF (peptide deformylase, mitochondrial). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

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See CG31278 in Genome Data Viewer
Location:
86C4-86C4; 3-50 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (10707398..10708340, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (6533120..6534062, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of eukaryotic peptide deformylases reveals universality of N-terminal protein processing mechanisms. Giglione C, et al. EMBO J, 2000 Nov 1. PMID 11060042, Free PMC Article
  2. Genome-wide association analysis of oxidative stress resistance in Drosophila melanogaster. Weber AL, et al. PLoS One, 2012. PMID 22496853, Free PMC Article
  3. Hedgehog Signaling Strength Is Orchestrated by the mir-310 Cluster of MicroRNAs in Response to Diet. Çiçek IÖ, et al. Genetics, 2016 Mar. PMID 26801178, Free PMC Article
  4. Genes conserved in bilaterians but jointly lost with Myc during nematode evolution are enriched in cell proliferation and cell migration functions. Erives AJ. Dev Genes Evol, 2015 Sep. PMID 26173873, Free PMC Article
  5. A protein complex network of Drosophila melanogaster. Guruharsha KG, et al. Cell, 2011 Oct 28. PMID 22036573, Free PMC Article

See all (26) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables peptide deformylase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables peptide deformylase activity IEA
Inferred from Electronic Annotation
more info
  
enables peptide deformylase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in co-translational protein modification IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG31278-PA
CG31278-PB
NP_001287273.1
NP_731494.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    10707398..10708340 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_169354.3 → NP_731494.1  uncharacterized protein Dmel_CG31278, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_731494.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VGY2
    Related
    FBpp0081795
    Conserved Domains (1) summary
    pfam01327
    Location:50 → 216
    Pep_deformylase; Polypeptide deformylase

  2. NM_001300344.1 → NP_001287273.1  uncharacterized protein Dmel_CG31278, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001287273.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0B4LI27
    Conserved Domains (1) summary
    cl00234
    Location:50 → 124
    Pep_deformylase; Polypeptide or peptide deformylase; a family of metalloenzymes that catalyzes the removal of the N-terminal formyl group in a growing polypeptide chain following translation initiation during protein synthesis in prokaryotes. These enzymes utilize Fe(II) ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A0B4LI27 A0A0B4LI27
Q9VGY2 Q9VGY2

Gene LinkOut

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