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gammaSnap2 gamma Soluble NSF attachment protein 2 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41239, updated on 4-Jan-2025

Summary

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Official Symbol
gammaSnap2provided by FlyBase
Official Full Name
gamma Soluble NSF attachment protein 2provided by FlyBase
Primary source
FLYBASE:FBgn0266721
Locus tag
Dmel_CG6208
See related
AllianceGenome:FB:FBgn0266721
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG6208; Dmel\CG6208; gammaSNAP; gammaSnap-2; SNAP-31
Summary
Predicted to enable soluble NSF attachment protein activity and syntaxin binding activity. Predicted to be involved in intracellular protein transport. Predicted to be part of SNARE complex. Is expressed in adult head. Orthologous to human NAPG (NSF attachment protein gamma). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

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See gammaSnap2 in Genome Data Viewer
Location:
85F13-85F13; 3-49 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (10120399..10121400, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (5946121..5947122, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Fragile X messenger ribonucleoprotein 1 Neighboring gene Carbonic anhydrase 7 Neighboring gene ATP synthase, epsilon subunit-like Neighboring gene antisense RNA:CR46038 Neighboring gene knickkopf

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mechanisms of neurotransmitter release. Littleton JT, et al. Int Rev Neurobiol, 1999. PMID 10218158
  2. Burst of young retrogenes and independent retrogene formation in mammals. Pan D, et al. PLoS One, 2009. PMID 19325906, Free PMC Article
  3. Age-dependent chromosomal distribution of male-biased genes in Drosophila. Zhang YE, et al. Genome Res, 2010 Nov. PMID 20798392, Free PMC Article
  4. RNA interference analysis of Legionella in Drosophila cells: exploitation of early secretory apparatus dynamics. Dorer MS, et al. PLoS Pathog, 2006 Apr. PMID 16652170, Free PMC Article
  5. A cautionary note for retrocopy identification: DNA-based duplication of intron-containing genes significantly contributes to the origination of single exon genes. Zhang YE, et al. Bioinformatics, 2011 Jul 1. PMID 21551137, Free PMC Article

See all (29) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables soluble NSF attachment protein activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables soluble NSF attachment protein activity NAS
Non-traceable Author Statement
more info
 PubMed 
enables syntaxin binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in intracellular protein transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
  
involved_in neurotransmitter secretion NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in synaptic vesicle priming NAS
Non-traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
part_of SNARE complex IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytoplasm NAS
Non-traceable Author Statement
more info
 PubMed 

General protein information

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Preferred Names
gamma soluble NSF attachment protein 2
Names
CG6208-PA
gammaSnap-2
gammaSnap2-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    10120399..10121400 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_141723.2 → NP_649980.1  gamma soluble NSF attachment protein 2 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649980.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    C3KGI9, Q9VH25
    Related
    FBpp0081673
    Conserved Domains (2) summary
    cd15832
    Location:29 → 61
    SNAP; TPR repeat [structural motif]
    cl24038
    Location:29 → 239
    SNAP; Soluble N-ethylmaleimide-sensitive factor (NSF) Attachment Protein family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VH25 Q9VH25

Gene LinkOut

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