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bocks bocksbeutel [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41162, updated on 9-Dec-2024

Summary

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Official Symbol
bocksprovided by FlyBase
Official Full Name
bocksbeutelprovided by FlyBase
Primary source
FLYBASE:FBgn0037719
Locus tag
Dmel_CG9424
See related
AllianceGenome:FB:FBgn0037719
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Bocks; Bocksbeutel; CG9424; Dmel\CG9424; emerin
Summary
Located in cytoplasm; membrane; and nucleus. Is expressed in adult head and organism. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See bocks in Genome Data Viewer
Location:
85D27-85D27; 3-48 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (9589468..9591002, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (5415190..5416724, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Son RNA binding protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene P58IPK Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Ensconsin-dependent changes in microtubule organization and LINC complex-dependent changes in nucleus-nucleus interactions result in quantitatively distinct myonuclear positioning defects. Collins MA, et al. Mol Biol Cell, 2021 Nov 1. PMID 34524872, Free PMC Article
  2. Drosophila emerins control LINC complex localization and transcription to regulate myonuclear position. Mandigo TR, et al. J Cell Sci, 2019 Oct 18. PMID 31548202
  3. Role of the smallish gene during Drosophila eye development. Tanaka R, et al. Gene, 2019 Feb 5. PMID 30359736
  4. Two novel LEM-domain proteins are splice products of the annotated Drosophila melanogaster gene CG9424 (Bocksbeutel). Wagner N, et al. Eur J Cell Biol, 2004 Jan. PMID 15035436
  5. The Drosophila melanogaster LEM-domain protein MAN1. Wagner N, et al. Eur J Cell Biol, 2006 Feb. PMID 16439308

See all (47) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nuclear envelope IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleoplasm IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
bocksbeutel
Names
CG9424-PA
CG9424-PB
bocks-PA
bocks-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    9589468..9591002 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_141660.4 → NP_649917.1  bocksbeutel, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649917.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q709R6
    Related
    FBpp0099981
    Conserved Domains (1) summary
    smart00540
    Location:5 → 48
    LEM; in nuclear membrane-associated proteins

  2. NM_001014611.3 → NP_001014611.1  bocksbeutel, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001014611.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q709R6, Q8SZZ5, Q9VHA7
    Conserved Domains (1) summary
    smart00540
    Location:5 → 48
    LEM; in nuclear membrane-associated proteins
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q709R6.1 Q709R6

Gene LinkOut

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