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RpL34b Ribosomal protein L34b [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41120, updated on 9-Dec-2024

Summary

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Official Symbol
RpL34bprovided by FlyBase
Official Full Name
Ribosomal protein L34bprovided by FlyBase
Primary source
FLYBASE:FBgn0037686
Locus tag
Dmel_CG9354
See related
AllianceGenome:FB:FBgn0037686
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-EST:fe1C10; anon-EST:fe1E8; CG9354; Dmel\CG9354; L34b; Rp L34b; RpL34
Summary
A structural constituent of ribosome. Predicted to be involved in ribosome biogenesis. Located in cytosolic ribosome. Is expressed in adult head; adult heart; and organism. Orthologous to human RPL34 (ribosomal protein L34). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

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See RpL34b in Genome Data Viewer
Location:
85D15-85D15; 3-48 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (9400237..9401226, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (5225959..5226948, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Odorant receptor 85f Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene BBSome interacting protein 1 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Deletion of Drosophila Nopp140 induces subcellular ribosomopathies. He F, et al. Chromosoma, 2015 Jun. PMID 25384888
  2. Loss of Drosophila nucleostemin 2 (NS2) blocks nucleolar release of the 60S subunit leading to ribosome stress. Wang Y, et al. Chromosoma, 2017 Jun. PMID 27150106
  3. Opbp is a new architectural/insulator protein required for ribosomal gene expression. Zolotarev N, et al. Nucleic Acids Res, 2017 Dec 1. PMID 29036346, Free PMC Article
  4. Ribosome heterogeneity in Drosophila melanogaster gonads through paralog-switching. Hopes T, et al. Nucleic Acids Res, 2022 Feb 28. PMID 34283226, Free PMC Article
  5. The LARK RNA-binding protein selectively regulates the circadian eclosion rhythm by controlling E74 protein expression. Huang Y, et al. PLoS One, 2007 Oct 31. PMID 17971870, Free PMC Article

See all (46) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables structural constituent of ribosome HDA PubMed 
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome TAS
Traceable Author Statement
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic translation IC
Inferred by Curator
more info
 PubMed 
involved_in cytoplasmic translation TAS
Traceable Author Statement
more info
 PubMed 
involved_in ribosome biogenesis IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of cytosolic large ribosomal subunit TAS
Traceable Author Statement
more info
 PubMed 
located_in cytosolic ribosome HDA PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ribosomal protein L34b
Names
CG9354-PA
CG9354-PB
CG9354-PC
CG9354-PD
RpL34b-PA
RpL34b-PB
RpL34b-PC
RpL34b-PD
anon-fast-evolving-1C10
anon-fast-evolving-1E8

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    9400237..9401226 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_169277.2 → NP_731345.1  ribosomal protein L34b, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_731345.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VHE5
    Related
    FBpp0081527
    Conserved Domains (1) summary
    pfam01199
    Location:1 → 94
    Ribosomal_L34e; Ribosomal protein L34e

  2. NM_001300321.1 → NP_001287250.1  ribosomal protein L34b, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001287250.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VHE5
    Conserved Domains (1) summary
    pfam01199
    Location:1 → 94
    Ribosomal_L34e; Ribosomal protein L34e

  3. NM_141630.2 → NP_649887.1  ribosomal protein L34b, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649887.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VHE5
    Related
    FBpp0081528
    Conserved Domains (1) summary
    pfam01199
    Location:1 → 94
    Ribosomal_L34e; Ribosomal protein L34e

  4. NM_001300320.1 → NP_001287249.1  ribosomal protein L34b, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001287249.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VHE5
    Conserved Domains (1) summary
    pfam01199
    Location:1 → 94
    Ribosomal_L34e; Ribosomal protein L34e
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VHE5 Q9VHE5

Gene LinkOut

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