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Ccp84Ac Ccp84Ac [ Drosophila melanogaster (fruit fly) ]

Gene ID: 40823, updated on 4-Jan-2025

Summary

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Official Symbol
Ccp84Acprovided by FlyBase
Official Full Name
Ccp84Acprovided by FlyBase
Primary source
FLYBASE:FBgn0004781
Locus tag
Dmel_CG1327
See related
AllianceGenome:FB:FBgn0004781
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BG:DS00004.3; cc6; Ccp; CG1327; DmelCcp84Ac; Dmel\CG1327
Summary
Predicted to be a structural constituent of chitin-based larval cuticle. Predicted to be involved in chitin-based cuticle development. Predicted to be located in chitin-based extracellular matrix. Predicted to be active in extracellular matrix. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See Ccp84Ac in Genome Data Viewer
Location:
84A3-84A4; 3-48 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (6695148..6696271, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (2520870..2521993, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Ccp84Ae Neighboring gene Ccp84Ad Neighboring gene long non-coding RNA:CR33938 Neighboring gene Ccp84Ab

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Coordinated regulation of Myc trans-activation targets by Polycomb and the Trithorax group protein Ash1. Goodliffe JM, et al. BMC Mol Biol, 2007 May 22. PMID 17519021, Free PMC Article
  2. Conservation of regulatory sequences and gene expression patterns in the disintegrating Drosophila Hox gene complex. Negre B, et al. Genome Res, 2005 May. PMID 15867430, Free PMC Article
  3. Extensive gene amplification and concerted evolution within the CPR family of cuticular proteins in mosquitoes. Cornman RS, et al. Insect Biochem Mol Biol, 2008 Jun. PMID 18510978, Free PMC Article
  4. Molecular and genetic organization of the antennapedia gene complex of Drosophila melanogaster. Kaufman TC, et al. Adv Genet, 1990. PMID 1971986
  5. HOM-C evolution in Drosophila: is there a need for Hox gene clustering? Negre B, et al. Trends Genet, 2007 Feb. PMID 17188778

See all (32) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables structural constituent of chitin-based larval cuticle ISM
Inferred from Sequence Model
more info
 PubMed 
Process Evidence Code Pubs
involved_in chitin-based cuticle development ISM
Inferred from Sequence Model
more info
 PubMed 
Component Evidence Code Pubs
located_in chitin-based extracellular matrix ISM
Inferred from Sequence Model
more info
 PubMed 
is_active_in extracellular matrix IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Ccp84Ac
Names
CG1327-PA
Ccp84Ac-PA
cuticle cluster 6
larval cuticle

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    6695148..6696271 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_141424.3 → NP_649681.1  Ccp84Ac [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649681.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O97060
    Related
    FBpp0081191
    Conserved Domains (1) summary
    pfam00379
    Location:65 → 117
    Chitin_bind_4; Insect cuticle protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O97060 O97060

Gene LinkOut

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