U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Arhgap20os Rho GTPase activating protein 20, opposite strand [ Mus musculus (house mouse) ]

Gene ID: 408028, updated on 17-Aug-2024

Summary

Official Symbol
Arhgap20osprovided by MGI
Official Full Name
Rho GTPase activating protein 20, opposite strandprovided by MGI
Primary source
MGI:MGI:3027124
See related
Ensembl:ENSMUSG00000074354 AllianceGenome:MGI:3027124
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
9230115E21Rik
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Arhgap20os in Genome Data Viewer
Location:
9 A5.3; 9 28.62 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (51750793..51787185, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (51839493..51875885, complement)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_24131 Neighboring gene ribosomal protein L9 pseudogene Neighboring gene STARR-positive B cell enhancer mm9_chr9:51513381-51513682 Neighboring gene predicted gene, 40520 Neighboring gene Rho GTPase activating protein 20 Neighboring gene CapStarr-seq enhancer MGSCv37_chr9:51654007-51654222 Neighboring gene CapStarr-seq enhancer MGSCv37_chr9:51674851-51675052 Neighboring gene RIKEN cDNA 4933407I05 gene Neighboring gene predicted gene 6980 Neighboring gene ferredoxin 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Other Names

  • Arhgap20 opposite strand transcript

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033560.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK033819, AK165145, BG069615
    Related
    ENSMUST00000125400.8

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    51750793..51787185 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)