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BC051226 cDNA sequence BC051226 [ Mus musculus (house mouse) ]

Gene ID: 407803, updated on 22-Oct-2024

Summary

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Official Symbol
BC051226provided by MGI
Official Full Name
cDNA sequence BC051226provided by MGI
Primary source
MGI:MGI:3039585
See related
Ensembl:ENSMUSG00000092564 AllianceGenome:MGI:3039585
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Ubiquitous expression in CNS E18 (RPKM 8.2), spleen adult (RPKM 7.6) and 28 other tissues See more
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Genomic context

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See BC051226 in Genome Data Viewer
Location:
17 B1; 17 17.98 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (34127156..34128152, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (33908182..33909178, complement)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene kinesin family member C1 Neighboring gene microRNA 6967-2 Neighboring gene STARR-seq mESC enhancer starr_42414 Neighboring gene small integral membrane protein 40 Neighboring gene STARR-positive B cell enhancer ABC_E8918 Neighboring gene STARR-seq mESC enhancer starr_42418 Neighboring gene STARR-positive B cell enhancer ABC_E5591 Neighboring gene Fas death domain-associated protein Neighboring gene STARR-positive B cell enhancer ABC_E4207 Neighboring gene zinc finger and BTB domain containing 22 Neighboring gene predicted gene, 19412

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Global discovery of erythroid long noncoding RNAs reveals novel regulators of red cell maturation. Alvarez-Dominguez JR, et al. Blood, 2014 Jan 23. PMID 24200680, Free PMC Article
  2. Widespread and dynamic translational control of red blood cell development. Alvarez-Dominguez JR, et al. Blood, 2017 Feb 2. PMID 27899360, Free PMC Article
  3. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  4. EUCOMM--the European conditional mouse mutagenesis program. Friedel RH, et al. Brief Funct Genomic Proteomic, 2007 Sep. PMID 17967808
  5. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045146.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AK136742, BX629519
    Related
    ENSMUST00000243517.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    34127156..34128152 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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