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CG42675 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 40722, updated on 9-Dec-2024

Summary

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Official Symbol
CG42675provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0261561
Locus tag
Dmel_CG42675
See related
AllianceGenome:FB:FBgn0261561
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-WO0140519.247; CG10999; CG31554; Dmel\CG42675
Old locus tag
Dmel_CG10999; Dmel_CG31554
Summary
Orthologous to human ZC2HC1A (zinc finger C2HC-type containing 1A) and ZC2HC1B (zinc finger C2HC-type containing 1B). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG42675 in Genome Data Viewer
Location:
83C4-83C4; 3-47.5 cM
Exon count:
8
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (5813609..5818820)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (1639331..1644542)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Hpr1 Neighboring gene uncharacterized protein Neighboring gene Secretory 20 Neighboring gene degringolade

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of ALK in Thinness. Orthofer M, et al. Cell, 2020 Jun 11. PMID 32442405
  2. Clockwork Orange is a transcriptional repressor and a new Drosophila circadian pacemaker component. Kadener S, et al. Genes Dev, 2007 Jul 1. PMID 17578907, Free PMC Article
  3. A direct role for cohesin in gene regulation and ecdysone response in Drosophila salivary glands. Pauli A, et al. Curr Biol, 2010 Oct 26. PMID 20933422, Free PMC Article
  4. Crtc modulates fasting programs associated with 1-C metabolism and inhibition of insulin signaling. Wang T, et al. Proc Natl Acad Sci U S A, 2021 Mar 23. PMID 33723074, Free PMC Article
  5. CRISPR/Cas9 mediated genetic resource for unknown kinase and phosphatase genes in Drosophila. Wu M, et al. Sci Rep, 2020 Apr 30. PMID 32355295, Free PMC Article

See all (26) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG42675-PB
CG42675-PC
CG42675-PD
CG42675-PE
CG42675-PF
CG42675-PG

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    5813609..5818820
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001202252.3 → NP_001189181.1  uncharacterized protein Dmel_CG42675, isoform F [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001189181.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8SXA7, Q9VNI7
    Conserved Domains (1) summary
    pfam13913
    Location:227 → 247
    zf-C2HC_2; zinc-finger of a C2HC-type

  2. NM_141336.2 → NP_649593.1  uncharacterized protein Dmel_CG42675, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649593.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8SXA7, Q9VNI7
    Related
    FBpp0291864
    Conserved Domains (1) summary
    pfam13913
    Location:227 → 247
    zf-C2HC_2; zinc-finger of a C2HC-type

  3. NM_169109.2 → NP_731012.1  uncharacterized protein Dmel_CG42675, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_731012.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8SXA7, Q9VNI7
    Related
    FBpp0291865
    Conserved Domains (1) summary
    pfam13913
    Location:227 → 247
    zf-C2HC_2; zinc-finger of a C2HC-type

  4. NM_001202251.2 → NP_001189180.1  uncharacterized protein Dmel_CG42675, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001189180.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    C9QPD4, Q8SXA7
    Conserved Domains (1) summary
    pfam13913
    Location:256 → 276
    zf-C2HC_2; zinc-finger of a C2HC-type

  5. NM_001275373.1 → NP_001262302.1  uncharacterized protein Dmel_CG42675, isoform G [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001262302.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0B4KGL2, Q8SXA7
    Conserved Domains (1) summary
    pfam13913
    Location:271 → 291
    zf-C2HC_2; zinc-finger of a C2HC-type

  6. NM_169111.2 → NP_731014.1  uncharacterized protein Dmel_CG42675, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_731014.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8IPQ7
    Related
    FBpp0291866
    Conserved Domains (1) summary
    pfam13913
    Location:31 → 51
    zf-C2HC_2; zinc-finger of a C2HC-type
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A0B4KGL2 A0A0B4KGL2
C9QPD4 C9QPD4
Q8IPQ7 Q8IPQ7
Q8SXA7 Q8SXA7
Q9VNI7 Q9VNI7

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