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gkap1 G kinase anchoring protein 1 [ Danio rerio (zebrafish) ]

Gene ID: 406581, updated on 9-Dec-2024

Summary

Official Symbol
gkap1provided by ZNC
Official Full Name
G kinase anchoring protein 1provided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-2485
See related
Ensembl:ENSDARG00000068123 AllianceGenome:ZFIN:ZDB-GENE-040426-2485
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:66236; zgc:85804; wu:fi16a08; zgc:110393
Summary
Predicted to be involved in signal transduction. Predicted to be located in Golgi apparatus. Orthologous to human GKAP1 (G kinase anchoring protein 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See gkap1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (49706387..49728754, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (49717613..49740288, complement)

Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene opsin 7, group member d Neighboring gene RAS and EF-hand domain containing Neighboring gene FERM domain containing 3 Neighboring gene Q-nucleotide N-glycosylase 1 Neighboring gene heterogeneous nuclear ribonucleoprotein K

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Process Evidence Code Pubs
involved_in signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within signal transduction IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
G kinase-anchoring protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_213072.2NP_998237.1  G kinase-anchoring protein 1

    See identical proteins and their annotated locations for NP_998237.1

    Status: VALIDATED

    Source sequence(s)
    BC067639, CV484924, EH444336, EH503286
    UniProtKB/Swiss-Prot
    Q503P0, Q6NWC9, Q7SYM2
    Related
    ENSDARP00000089091.3, ENSDART00000098319.5
    Conserved Domains (1) summary
    cl19219
    Location:251350
    DUF342; Protein of unknown function (DUF342)

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007119.7 Reference GRCz11 Primary Assembly

    Range
    49706387..49728754 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005167321.5XP_005167378.1  G kinase-anchoring protein 1 isoform X1

    See identical proteins and their annotated locations for XP_005167378.1

    UniProtKB/Swiss-Prot
    Q503P0, Q6NWC9, Q7SYM2
    Conserved Domains (1) summary
    cl19219
    Location:251350
    DUF342; Protein of unknown function (DUF342)