acbd3 acyl-Coenzyme A binding domain containing 3 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: acbd3provided by ZNC
Official Full Name: acyl-Coenzyme A binding domain containing 3provided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-1930
See related: Ensembl:ENSDARG00000042623 AllianceGenome:ZFIN:ZDB-GENE-040426-1930
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fa20g08; zgc:66303; wu:fa20g08; si:dkey-267p15.1
Summary: Predicted to enable fatty-acyl-CoA binding activity. Predicted to be active in Golgi membrane. Orthologous to human ACBD3 (acyl-CoA binding domain containing 3). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 20

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	20	NC_007131.7 (30702528..30721862)
105	previous assembly	GRCz10 (GCF_000002035.5)	20	NC_007131.6 (30799649..30818983)

Chromosome 20 - NC_007131.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables fatty-acyl-CoA binding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in Golgi membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: Golgi resident protein GCP60

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001328207.1 → NP_001315136.1 Golgi resident protein GCP60

Status: VALIDATED

Source sequence(s)

BX510322

UniProtKB/TrEMBL

A0A8M1P3M8, Q5RHP5

Related

ENSDARP00000062524.4, ENSDART00000062525.7

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

NC_007131.7 Reference GRCz11 Primary Assembly

Range

30702528..30721862

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_068215407.1 → XP_068071508.1 Golgi resident protein GCP60 isoform X1

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

NM_212997.1: Suppressed sequence

Description

NM_212997.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.