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Vps24 Vacuolar protein sorting 24 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 40542, updated on 4-Jan-2025

Summary

Official Symbol
Vps24provided by FlyBase
Official Full Name
Vacuolar protein sorting 24provided by FlyBase
Primary source
FLYBASE:FBgn0037231
Locus tag
Dmel_CG9779
See related
AllianceGenome:FB:FBgn0037231
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG9779; Dmel\CG9779; DmVPS24; dvps24; ESCRT; vps24
Summary
Predicted to be involved in several processes, including endosome transport via multivesicular body sorting pathway; intralumenal vesicle formation; and late endosome to vacuole transport. Predicted to be part of ESCRT III complex. Predicted to be active in multivesicular body. Is expressed in several structures, including adult head; embryonic dorsal epidermis; embryonic ventral epidermis; ganglia; and larval nervous system. Orthologous to human RNF103-CHMP3 (RNF103-CHMP3 readthrough) and CHMP3 (charged multivesicular body protein 3). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See Vps24 in Genome Data Viewer
Location:
82A3-82A3; 3-47.1 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (4307435..4310947, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (135369..136669, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene complexin Neighboring gene Neprilysin-like 11 Neighboring gene mir-929 stem loop Neighboring gene antisense RNA:CR46140 Neighboring gene Melanization Protease 1 Neighboring gene Suv3 helicase Neighboring gene Synaptotagmin 14 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

  • Annotated by Drosophila Heterochromatin Genome Project, Lawrence Berkeley National Lab, http://www.dhgp.org

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in endosome transport via multivesicular body sorting pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in intralumenal vesicle formation ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in late endosome to vacuole transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in vacuolar transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of ESCRT III complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of ESCRT III complex ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
is_active_in multivesicular body IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
vacuolar protein sorting 24
Names
CG9779-PA
CG9779-PB
Vps24-PA
Vps24-PB
charged multivesicular body protein 3

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    4307435..4310947 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001316528.1NP_001303457.1  vacuolar protein sorting 24, isoform B [Drosophila melanogaster]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VN02
    Conserved Domains (1) summary
    pfam03357
    Location:18187
    Snf7; Snf7
  2. NM_141194.3NP_649451.1  vacuolar protein sorting 24, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649451.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VN02
    Related
    FBpp0078598
    Conserved Domains (1) summary
    pfam03357
    Location:18187
    Snf7; Snf7