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slif slimfast [ Drosophila melanogaster (fruit fly) ]

Gene ID: 40510, updated on 4-Jan-2025

Summary

Official Symbol
slifprovided by FlyBase
Official Full Name
slimfastprovided by FlyBase
Primary source
FLYBASE:FBgn0037203
Locus tag
Dmel_CG11128
See related
AllianceGenome:FB:FBgn0037203
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG11128; Dmel\CG11128; Slif; SLIF; SLIMFAST
Summary
Enables basic amino acid transmembrane transporter activity. Involved in amino acid import across plasma membrane; lipid homeostasis; and regulation of growth. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including anterior-posterior subdivision of organism; embryonic salivary gland duct; embryonic/larval fat body; embryonic/larval salivary gland common duct; and gland. Orthologous to human SLC7A1 (solute carrier family 7 member 1); SLC7A2 (solute carrier family 7 member 2); and SLC7A3 (solute carrier family 7 member 3). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See slif in Genome Data Viewer
Location:
80B2-80B2; 3-47 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (22881045..22893821)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (22874145..22886921)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR45968 Neighboring gene uncharacterized protein Neighboring gene Chromator Neighboring gene antisense RNA:CR45970 Neighboring gene Suppressor of stem-loop mutation Neighboring gene long non-coding RNA:CR44688 Neighboring gene long non-coding RNA:CR44689

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

mobile_element

  • Loc: 22883443-22883529 mobile_element_type = transposon:INE-1{}2694
  • Loc: 22884585-22884738 mobile_element_type = transposon:INE-1{}2695
  • Loc: 22890587-22890811 mobile_element_type = transposon:INE-1{}2700

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables L-arginine transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables L-lysine transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables L-ornithine transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables basic amino acid transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IC
Inferred by Curator
more info
PubMed 

General protein information

Preferred Names
slimfast
Names
CG11128-PA
CG11128-PB
CG11128-PC
slif-PA
slif-PB
slif-PC
slim fast

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    22881045..22893821
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_168977.2NP_730764.1  slimfast, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_730764.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VNP7
    Related
    FBpp0078206
    Conserved Domains (2) summary
    TIGR00906
    Location:8557
    2A0303; cationic amino acid transport permease
    pfam13906
    Location:507557
    AA_permease_C; C-terminus of AA_permease
  2. NM_141171.3NP_649428.1  slimfast, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649428.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VNP7
    Related
    FBpp0078207
    Conserved Domains (2) summary
    TIGR00906
    Location:8557
    2A0303; cationic amino acid transport permease
    pfam13906
    Location:507557
    AA_permease_C; C-terminus of AA_permease
  3. NM_168978.2NP_730765.1  slimfast, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_730765.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VNP7
    Related
    FBpp0078208
    Conserved Domains (2) summary
    TIGR00906
    Location:8557
    2A0303; cationic amino acid transport permease
    pfam13906
    Location:507557
    AA_permease_C; C-terminus of AA_permease