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MED1 Mediator complex subunit 1 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 40403, updated on 9-Dec-2024

Summary

Official Symbol
MED1provided by FlyBase
Official Full Name
Mediator complex subunit 1provided by FlyBase
Primary source
FLYBASE:FBgn0037109
Locus tag
Dmel_CG7162
See related
AllianceGenome:FB:FBgn0037109
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG7162; Dmel\CG7162; dTRAP220; FBgn0037109; Med1; Med1/SOP3/TRAP220; Trap220
Summary
Enables transcription coregulator activity. Involved in positive regulation of transcription by RNA polymerase II. Part of mediator complex. Is expressed in organism. Orthologous to human MED1 (mediator complex subunit 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See MED1 in Genome Data Viewer
Location:
78E1-78E1; 3-47 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (21628325..21634446, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (21621425..21627546, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ALG11, alpha-1,2-mannosyltransferase Neighboring gene antisense RNA:CR45955 Neighboring gene Orosomucoid 1-like Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables transcription coregulator activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 
enables transcription coregulator activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables transcription coregulator activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Component Evidence Code Pubs
part_of mediator complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of mediator complex IC
Inferred by Curator
more info
PubMed 
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 
part_of mediator complex IMP
Inferred from Mutant Phenotype
more info
PubMed 
part_of mediator complex ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
located_in nucleus IC
Inferred by Curator
more info
PubMed 

General protein information

Preferred Names
mediator complex subunit 1
Names
CG7162-PA
CG7162-PB
CG7162-PC
MED1-PA
MED1-PB
MED1-PC
mediator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    21628325..21634446 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001275254.1NP_001262183.1  mediator complex subunit 1, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001262183.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    C8VV55, M9PII7
    Conserved Domains (1) summary
    pfam10744
    Location:75431
    Med1; Mediator of RNA polymerase II transcription subunit 1
  2. NM_141084.3NP_649341.1  mediator complex subunit 1, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649341.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B5RJH3, Q9GYW7, Q9VP05
    Related
    FBpp0078118
    Conserved Domains (1) summary
    pfam10744
    Location:75431
    Med1; Mediator of RNA polymerase II transcription subunit 1
  3. NM_001202224.2NP_001189153.1  mediator complex subunit 1, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001189153.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    C8VV55, H8F4P0
    Conserved Domains (1) summary
    pfam10744
    Location:75431
    Med1; Mediator of RNA polymerase II transcription subunit 1