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c1ql3b complement component 1, q subcomponent-like 3b [ Danio rerio (zebrafish) ]

Gene ID: 403002, updated on 4-Jan-2025

Summary

Official Symbol
c1ql3bprovided by ZNC
Official Full Name
complement component 1, q subcomponent-like 3bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-1836
See related
Ensembl:ENSDARG00000036483 AllianceGenome:ZFIN:ZDB-GENE-040426-1836
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
Crf1; c1ql1; c1ql1a; zgc:77412
Summary
Predicted to be located in extracellular region. Orthologous to several human genes including C1QL1 (complement C1q like 1). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See c1ql3b in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 2 NC_007113.7 (3595333..3597975)
105 previous assembly GRCz10 (GCF_000002035.5) 2 NC_007113.6 (3764154..3766796)

Chromosome 2 - NC_007113.7Genomic Context describing neighboring genes Neighboring gene fuzzy planar cell polarity protein Neighboring gene glutamic--pyruvic transaminase Neighboring gene phosphotriesterase related Neighboring gene matrix metallopeptidase 16b (membrane-inserted)

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
complement C1q-like protein 3b
Names
complement component 1, q subcomponent-like 1a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_205701.1NP_991264.1  complement C1q-like protein 3b precursor

    See identical proteins and their annotated locations for NP_991264.1

    Status: PROVISIONAL

    Source sequence(s)
    BC065968
    UniProtKB/TrEMBL
    A0A8M1PK37, Q6NZU2
    Related
    ENSDARP00000041051.4, ENSDART00000041052.5
    Conserved Domains (1) summary
    pfam00386
    Location:119243
    C1q; C1q domain

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007113.7 Reference GRCz11 Primary Assembly

    Range
    3595333..3597975
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)