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CG6996 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 40212, updated on 4-Jan-2025

Summary

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Official Symbol
CG6996provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0036950
Locus tag
Dmel_CG6996
See related
AllianceGenome:FB:FBgn0036950
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG6996
Summary
Predicted to enable chitin binding activity. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See CG6996 in Genome Data Viewer
Location:
77A2-77A2; 3-47 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (20207534..20209600)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (20200634..20202700)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR32224 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bowman-Birk inhibitor affects pathways associated with energy metabolism in Drosophila melanogaster. Li HM, et al. Insect Mol Biol, 2010 Jun 1. PMID 20113373
  2. Transcriptional signatures in response to wheat germ agglutinin and starvation in Drosophila melanogaster larval midgut. Li HM, et al. Insect Mol Biol, 2009 Feb. PMID 19196346
  3. Activating transcription factor 3 regulates immune and metabolic homeostasis. Rynes J, et al. Mol Cell Biol, 2012 Oct. PMID 22851689, Free PMC Article
  4. Conserved chromosomal clustering of genes governed by chromatin regulators in Drosophila. Blanco E, et al. Genome Biol, 2008. PMID 18783608, Free PMC Article
  5. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article

See all (23) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables chitin binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG6996-PB
CG6996-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    20207534..20209600
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001275165.1 → NP_001262094.1  uncharacterized protein Dmel_CG6996, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001262094.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8WHK4, Q9VW92
    Conserved Domains (2) summary
    smart00494
    Location:85 → 130
    ChtBD2; Chitin-binding domain type 2
    pfam01607
    Location:146 → 196
    CBM_14; Chitin binding Peritrophin-A domain

  2. NM_140932.3 → NP_649189.2  uncharacterized protein Dmel_CG6996, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649189.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8WHK4, Q9VW92
    Conserved Domains (2) summary
    smart00494
    Location:85 → 130
    ChtBD2; Chitin-binding domain type 2
    pfam01607
    Location:146 → 196
    CBM_14; Chitin binding Peritrophin-A domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VW92 Q9VW92

Gene LinkOut

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