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CG7290 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 40211, updated on 9-Dec-2024

Summary

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Official Symbol
CG7290provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0036949
Locus tag
Dmel_CG7290
See related
AllianceGenome:FB:FBgn0036949
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG7290
Summary
Predicted to enable chitin binding activity. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG7290 in Genome Data Viewer
Location:
77A2-77A2; 3-47 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (20204309..20206046, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (20197409..20199146, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene obstructor-F Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR32224 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Temperature, rainfall and wind variables underlie environmental adaptation in natural populations of Drosophila melanogaster. Bogaerts-Márquez M, et al. Mol Ecol, 2021 Feb. PMID 33350518, Free PMC Article
  2. Functional characterization and gene expression profiling of Drosophila melanogaster short dADA2b isoform-containing dSAGA complexes. Pankotai T, et al. BMC Genomics, 2013 Jan 22. PMID 23336284, Free PMC Article
  3. Two subunits specific to the PBAP chromatin remodeling complex have distinct and redundant functions during drosophila development. Carrera I, et al. Mol Cell Biol, 2008 Sep. PMID 18573871, Free PMC Article
  4. Conserved chromosomal clustering of genes governed by chromatin regulators in Drosophila. Blanco E, et al. Genome Biol, 2008. PMID 18783608, Free PMC Article
  5. Protein interaction mapping: a Drosophila case study. Formstecher E, et al. Genome Res, 2005 Mar. PMID 15710747, Free PMC Article

See all (21) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables chitin binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG7290-PA
CG7290-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    20204309..20206046 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001275164.1 → NP_001262093.1  uncharacterized protein Dmel_CG7290, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001262093.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8SYE6, Q9VW91
    Conserved Domains (2) summary
    smart00494
    Location:296 → 331
    ChtBD2; Chitin-binding domain type 2
    pfam01607
    Location:32 → 77
    CBM_14; Chitin binding Peritrophin-A domain

  2. NM_140931.3 → NP_649188.1  uncharacterized protein Dmel_CG7290, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649188.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8SYE6, Q9VW91
    Related
    FBpp0074627
    Conserved Domains (2) summary
    smart00494
    Location:296 → 331
    ChtBD2; Chitin-binding domain type 2
    pfam01607
    Location:32 → 77
    CBM_14; Chitin binding Peritrophin-A domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VW91 Q9VW91

Gene LinkOut

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