U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CG5290 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 39998, updated on 4-Jan-2025

Summary

Go to the top of the page Help
Official Symbol
CG5290provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0036772
Locus tag
Dmel_CG5290
See related
AllianceGenome:FB:FBgn0036772
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG5290
Summary
Is expressed in several structures, including anterior endoderm; anterior endoderm anlage; embryonic/larval midgut; embryonic/larval midgut primordium; and posterior endoderm. Orthologous to human TTC27 (tetratricopeptide repeat domain 27). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CG5290 in Genome Data Viewer
Location:
75A8-75A8; 3-45 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (17909483..17912565, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (17902583..17905665, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Tetraspanin 74F Neighboring gene prestin Neighboring gene WD repeat domain 92 Neighboring gene long non-coding RNA:CR43174 Neighboring gene long non-coding RNA:CR45393

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Whole-genome analysis reveals that active heat shock factor binding sites are mostly associated with non-heat shock genes in Drosophila melanogaster. Gonsalves SE, et al. PLoS One, 2011 Jan 14. PMID 21264254, Free PMC Article
  2. Mettl3-dependent m(6)A modification attenuates the brain stress response in Drosophila. Perlegos AE, et al. Nat Commun, 2022 Sep 14. PMID 36104353, Free PMC Article
  3. Genome-wide analysis of self-renewal in Drosophila neural stem cells by transgenic RNAi. Neumüller RA, et al. Cell Stem Cell, 2011 May 6. PMID 21549331, Free PMC Article
  4. Drosophila muller f elements maintain a distinct set of genomic properties over 40 million years of evolution. Leung W, et al. G3 (Bethesda), 2015 Mar 4. PMID 25740935, Free PMC Article
  5. Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. Blanco E, et al. BMC Dev Biol, 2010 Sep 2. PMID 20813047, Free PMC Article

See all (30) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein
Names
CG5290-PA

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    17909483..17912565 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_140769.3 → NP_649026.1  uncharacterized protein Dmel_CG5290 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649026.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q5U160, Q9VVM8
    Related
    FBpp0074918
    Conserved Domains (2) summary
    sd00006
    Location:493 → 520
    TPR; TPR repeat [structural motif]
    pfam13414
    Location:493 → 557
    TPR_11; TPR repeat
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5U160 Q5U160
Q8T9D2 Q8T9D2
Q9VVM8 Q9VVM8

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools