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arf2a ARF GTPase 2a [ Danio rerio (zebrafish) ]

Gene ID: 399477, updated on 4-Jan-2025

Summary

Official Symbol
arf2aprovided by ZNC
Official Full Name
ARF GTPase 2aprovided by ZNC
Primary source
ZFIN:ZDB-GENE-040122-4
See related
Ensembl:ENSDARG00000014763 AllianceGenome:ZFIN:ZDB-GENE-040122-4
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
arf2; wu:fa19d10
Summary
Predicted to enable GTP binding activity. Predicted to be involved in intracellular protein transport and vesicle-mediated transport. Predicted to act upstream of or within protein transport. Predicted to be located in Golgi apparatus. Predicted to be active in cytoplasm and plasma membrane. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See arf2a in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (37558491..37571601, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (37416633..37429743, complement)

Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene PSMC3 interacting protein Neighboring gene MAX dimerization protein MLX Neighboring gene formin-like 1a Neighboring gene SRC kinase signaling inhibitor 1a Neighboring gene transfer RNA leucine (anticodon CAA) Neighboring gene wingless-type MMTV integration site family, member 9B

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables GTP binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in intracellular protein transport IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within protein transport IEA
Inferred from Electronic Annotation
more info
 
involved_in vesicle-mediated transport IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
ARF GTPase 2a
Names
ADP-ribosylation factor 2
ADP-ribosylation factor 2a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_201504.1NP_958912.1  ARF GTPase 2a

    See identical proteins and their annotated locations for NP_958912.1

    Status: PROVISIONAL

    Source sequence(s)
    BC050487
    UniProtKB/TrEMBL
    Q7ZUA0
    Related
    ENSDARP00000015805.4, ENSDART00000016407.7
    Conserved Domains (1) summary
    cl21455
    Location:5179
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007114.7 Reference GRCz11 Primary Assembly

    Range
    37558491..37571601 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)