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Zcchc7 Zinc finger CCHC-type containing 7 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 39883, updated on 9-Dec-2024

Summary

Official Symbol
Zcchc7provided by FlyBase
Official Full Name
Zinc finger CCHC-type containing 7provided by FlyBase
Primary source
FLYBASE:FBgn0036668
Locus tag
Dmel_CG9715
See related
AllianceGenome:FB:FBgn0036668
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG9715; Dmel\CG9715; dZcchc7
Summary
Predicted to enable RNA binding activity. Involved in defense response to virus. Predicted to be part of TRAMP complex. Orthologous to human ZCCHC7 (zinc finger CCHC-type containing 7). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See Zcchc7 in Genome Data Viewer
Location:
73D1-73D1; 3-45 cM
Exon count:
6
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (16845386..16852350)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (16838486..16845450)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene nudC Neighboring gene uncharacterized protein Neighboring gene Tumor susceptibility gene 101 Neighboring gene uncharacterized protein Neighboring gene kuduk Neighboring gene Rhodopsin 4 Neighboring gene seven in absentia Neighboring gene sina homologue

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in TRAMP-dependent tRNA surveillance pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in defense response to virus IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in nuclear mRNA surveillance of mRNA 3'-end processing IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in nuclear polyadenylation-dependent CUT catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in nuclear polyadenylation-dependent rRNA catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in nuclear polyadenylation-dependent snRNA catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in nuclear polyadenylation-dependent snoRNA catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
part_of TRAMP complex IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
zinc finger CCHC-type containing 7
Names
CG9715-PA
Zcchc7-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    16845386..16852350
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_140669.4NP_648926.3  zinc finger CCHC-type containing 7 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_648926.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VVA9
    Related
    FBpp0075089
    Conserved Domains (1) summary
    PTZ00368
    Location:827937
    PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional