acod1lb.L aconitate decarboxylase 1 like gene b L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: acod1lb.L
Official Full Name: aconitate decarboxylase 1 like gene b L homeolog
Primary source: Xenbase:XB-GENE-919735
See related: AllianceGenome:Xenbase:XB-GENE-919735
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: irg1; xirg; acod1; irg1l; x-irg; irg1.L; acod1.L; irg1l.L
Summary: Predicted to enable lyase activity. Is expressed in dermal system and ectoderm. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

Location:: chromosome: 8L

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	8L	NC_054385.1 (36588323..36593515, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	Unplaced Scaffold	NW_016757514.1 (1..320, complement)

Chromosome 8L - NC_054385.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables lyase activity	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: aconitate decarboxylase 1 like gene b L homeolog

Names: aconitate decarboxylase 1 L homeolog; aconitate decarboxylase 1e L homeolog; immunoresponsive gene 1 L homeolog; immunoresponsive gene 1, like L homeolog; putative XIRG protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001088443.1 → NP_001081912.1 aconitate decarboxylase 1 like gene b L homeolog

See identical proteins and their annotated locations for NP_001081912.1

Status: PROVISIONAL

Source sequence(s)

AJ278067

UniProtKB/TrEMBL

B7ZQ91, Q9DGG0

Conserved Domains (1) summary

pfam03972
Location:40 → 480

MmgE_PrpD; MmgE/PrpD family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

36588323..36593515 complement

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GenBank, FASTA, Sequence Viewer (Graphics)