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CG4950 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 39783, updated on 4-Jan-2025

Summary

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Official Symbol
CG4950provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0036587
Locus tag
Dmel_CG4950
See related
AllianceGenome:FB:FBgn0036587
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CT15890; Dmel\CG4950
Summary
Is expressed in adult head. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See CG4950 in Genome Data Viewer
Location:
72D10-72D10; 3-44 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (16265797..16268156, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (16258897..16261256, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The MAPKKK Mekk1 regulates the expression of Turandot stress genes in response to septic injury in Drosophila. Brun S, et al. Genes Cells, 2006 Apr. PMID 16611243
  2. RNA degradation is required for the germ-cell to maternal transition in Drosophila. Blatt P, et al. Curr Biol, 2021 Jul 26. PMID 33989522, Free PMC Article
  3. The transcriptional diversity of 25 Drosophila cell lines. Cherbas L, et al. Genome Res, 2011 Feb. PMID 21177962, Free PMC Article
  4. Conserved chromosomal clustering of genes governed by chromatin regulators in Drosophila. Blanco E, et al. Genome Biol, 2008. PMID 18783608, Free PMC Article
  5. Growth deregulation and interaction with host hemocytes contribute to tumor progression in a Drosophila brain tumor model. Voutyraki C, et al. Proc Natl Acad Sci U S A, 2023 Aug 15. PMID 37549261, Free PMC Article

See all (27) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG4950-PB
CG4950-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    16265797..16268156 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001275005.1 → NP_001261934.1  uncharacterized protein Dmel_CG4950, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001261934.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    D0IQE5, Q9VV09
    Conserved Domains (3) summary
    cd00116
    Location:207 → 432
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:96 → 119
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:118 → 178
    LRR_8; Leucine rich repeat

  2. NM_140598.3 → NP_648855.2  uncharacterized protein Dmel_CG4950, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_648855.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    D0IQE5, Q9VV09
    Conserved Domains (3) summary
    cd00116
    Location:207 → 432
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:96 → 119
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:118 → 178
    LRR_8; Leucine rich repeat
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VV09 Q9VV09

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