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UOX urate oxidase [ Sus scrofa (pig) ]

Gene ID: 397510, updated on 17-Aug-2024

Summary

Official Symbol
UOXprovided by VGNC
Official Full Name
urate oxidaseprovided by VGNC
Primary source
VGNC:VGNC:109166
See related
Ensembl:ENSSSCG00000022206
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Biased expression in liver (RPKM 85.1) and mixtures (RPKM 29.1) See more
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Genomic context

See UOX in Genome Data Viewer
Location:
chromosome: 6
Exon count:
8
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 6 NC_010448.4 (129343632..129374833)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) Unplaced Scaffold NW_003538465.1 (127535..158234)

Chromosome 6 - NC_010448.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102166593 Neighboring gene ribosome production factor 1 homolog Neighboring gene deoxyribonuclease 2 beta Neighboring gene high mobility group protein B3 pseudogene Neighboring gene dnaJ homolog subfamily B member 6 pseudogene Neighboring gene sterile alpha motif domain containing 13

Genomic regions, transcripts, and products

Expression

  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables urate oxidase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in purine nucleobase catabolic process IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in urate catabolic process IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_214270.1NP_999435.1  uricase precursor

    See identical proteins and their annotated locations for NP_999435.1

    Status: PROVISIONAL

    Source sequence(s)
    M27697
    UniProtKB/Swiss-Prot
    P16164
    UniProtKB/TrEMBL
    A0A4X1UZG8, A0A8D1R1Z2, I3LL15
    Related
    ENSSSCP00000024781.2, ENSSSCT00000024132.3
    Conserved Domains (1) summary
    TIGR03383
    Location:15298
    urate_oxi; urate oxidase

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010448.4 Reference Sscrofa11.1 Primary Assembly

    Range
    129343632..129374833
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)