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CG10154 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 39509, updated on 9-Dec-2024

Summary

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Official Symbol
CG10154provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0036361
Locus tag
Dmel_CG10154
See related
AllianceGenome:FB:FBgn0036361
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG10154
Summary
Predicted to enable chitin binding activity. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG10154 in Genome Data Viewer
Location:
70B1-70B1; 3-40 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (13435680..13437136, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (13428780..13430236, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene transfer RNA:Valine-AAC 2-3 Neighboring gene transfer RNA:Valine-AAC 2-4 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Drosophila type IV collagen mutation associates with immune system activation and intestinal dysfunction. Kiss M, et al. Matrix Biol, 2016 Jan. PMID 26363084
  2. Heat-shock promoters: targets for evolution by P transposable elements in Drosophila. Walser JC, et al. PLoS Genet, 2006 Oct 6. PMID 17029562, Free PMC Article
  3. The evolution of constitutively active humoral immune defenses in Drosophila populations under high parasite pressure. Zhou SO, et al. PLoS Pathog, 2024 Jan. PMID 38206983, Free PMC Article
  4. Microbiota-induced changes in drosophila melanogaster host gene expression and gut morphology. Broderick NA, et al. mBio, 2014 May 27. PMID 24865556, Free PMC Article
  5. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article

See all (23) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables chitin binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG10154-PA
CG10154-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    13435680..13437136 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_140389.3 → NP_648646.2  uncharacterized protein Dmel_CG10154, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_648646.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8SX42, Q9VU72
    Related
    FBpp0075589
    Conserved Domains (2) summary
    smart00494
    Location:263 → 311
    ChtBD2; Chitin-binding domain type 2
    pfam01607
    Location:197 → 239
    CBM_14; Chitin binding Peritrophin-A domain

  2. NM_001202160.2 → NP_001189089.1  uncharacterized protein Dmel_CG10154, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001189089.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8SX42, Q9VU72
    Conserved Domains (2) summary
    smart00494
    Location:263 → 311
    ChtBD2; Chitin-binding domain type 2
    pfam01607
    Location:197 → 239
    CBM_14; Chitin binding Peritrophin-A domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8SX42 Q8SX42
Q9VU72 Q9VU72

Gene LinkOut

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