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sowah sosondowah [ Drosophila melanogaster (fruit fly) ]

Gene ID: 39438, updated on 9-Dec-2024

Summary

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Official Symbol
sowahprovided by FlyBase
Official Full Name
sosondowahprovided by FlyBase
Primary source
FLYBASE:FBgn0036302
Locus tag
Dmel_CG10632
See related
AllianceGenome:FB:FBgn0036302
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:GM09162; CG10632; Dmel\CG10632; Sowah
Summary
Orthologous to several human genes including SOWAHB (sosondowah ankyrin repeat domain family member B). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See sowah in Genome Data Viewer
Location:
69C6-69C8; 3-38 cM
Exon count:
13
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (12537513..12572542, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (12530613..12565642, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43612 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Phosphomannomutase type 2 Neighboring gene araucan Neighboring gene caupolican

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolutionary history of the iroquois/Irx genes in metazoans. Kerner P, et al. BMC Evol Biol, 2009 Apr 15. PMID 19368711, Free PMC Article
  2. Convergent evolution of clustering of Iroquois homeobox genes across metazoans. Irimia M, et al. Mol Biol Evol, 2008 Aug. PMID 18469332
  3. Novel perspectives of target-binding by the evolutionarily conserved PP4 phosphatase. Karman Z, et al. Open Biol, 2020 Dec. PMID 33352067, Free PMC Article
  4. Drosophila Insulin-Like Peptides DILP2 and DILP5 Differentially Stimulate Cell Signaling and Glycogen Phosphorylase to Regulate Longevity. Post S, et al. Front Endocrinol (Lausanne), 2018. PMID 29892262, Free PMC Article
  5. Computation-based discovery of related transcriptional regulatory modules and motifs using an experimentally validated combinatorial model. Halfon MS, et al. Genome Res, 2002 Jul. PMID 12097338, Free PMC Article

See all (37) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
sosondowah
Names
CG10632-PG
CG10632-PH
CG10632-PI
CG10632-PJ
sowah-PG
sowah-PH
sowah-PI
sowah-PJ

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    12537513..12572542 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_168503.5 → NP_729816.4  sosondowah, isoform I [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_729816.4

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q960W9
    Conserved Domains (3) summary
    cd00204
    Location:315 → 398
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam13637
    Location:315 → 368
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:315 → 346
    ANK; ANK repeat [structural motif]

  2. NM_001144469.3 → NP_001137941.2  sosondowah, isoform H [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001137941.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    B7Z0A9
    Conserved Domains (3) summary
    cd00204
    Location:315 → 398
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam13637
    Location:315 → 368
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:315 → 346
    ANK; ANK repeat [structural motif]

  3. NM_001144471.3 → NP_001137943.2  sosondowah, isoform G [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001137943.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    B7Z0B0
    Conserved Domains (3) summary
    cd00204
    Location:315 → 393
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam13637
    Location:315 → 368
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:315 → 346
    ANK; ANK repeat [structural motif]

  4. NM_001144470.3 → NP_001137942.2  sosondowah, isoform J [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001137942.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    B7Z0B1
    Conserved Domains (3) summary
    cd00204
    Location:315 → 393
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam13637
    Location:315 → 368
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:315 → 346
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
B7Z0A9 B7Z0A9
B7Z0B0 B7Z0B0
B7Z0B1 B7Z0B1
Q8T9J1 Q8T9J1
Q960W9 Q960W9

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