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CG10681 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 39425, updated on 9-Dec-2024

Summary

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Official Symbol
CG10681provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0036291
Locus tag
Dmel_CG10681
See related
AllianceGenome:FB:FBgn0036291
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG10681
Summary
Predicted to be involved in lysosome localization. Predicted to be part of BORC complex. Is expressed in organism. Orthologous to human KXD1 (KxDL motif containing 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

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See CG10681 in Genome Data Viewer
Location:
69C4-69C4; 3-38 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (12501513..12502647)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (12494613..12495747)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR45682 Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR43868 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene vihar Neighboring gene sticky Neighboring gene long non-coding RNA:CR45168

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-Wide Mapping Targets of the Metazoan Chromatin Remodeling Factor NURF Reveals Nucleosome Remodeling at Enhancers, Core Promoters and Gene Insulators. Kwon SY, et al. PLoS Genet, 2016 Apr. PMID 27046080, Free PMC Article
  2. Mobile-phone radiation-induced perturbation of gene-expression profiling, redox equilibrium and sporadic-apoptosis control in the ovary of Drosophila melanogaster. Manta AK, et al. Fly (Austin), 2017 Apr 3. PMID 27960592, Free PMC Article
  3. Tissue-specific (ts)CRISPR as an efficient strategy for in vivo screening in Drosophila. Meltzer H, et al. Nat Commun, 2019 May 8. PMID 31068592, Free PMC Article
  4. Putative synaptic genes defined from a Drosophila whole body developmental transcriptome by a machine learning approach. Pazos Obregón F, et al. BMC Genomics, 2015 Sep 15. PMID 26370122, Free PMC Article
  5. Transcriptomic analysis of inbreeding depression in cold-sensitive Drosophila melanogaster shows upregulation of the immune response. Vermeulen CJ, et al. J Evol Biol, 2013 Sep. PMID 23944235

See all (26) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in lysosome localization IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of BORC complex IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG10681-PA
CG10681-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    12501513..12502647
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001274837.1 → NP_001261766.1  uncharacterized protein Dmel_CG10681, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001261766.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VTY4
    UniProtKB/TrEMBL
    M9PFF6
    Conserved Domains (1) summary
    pfam10241
    Location:36 → 114
    KxDL; Uncharacterized conserved protein

  2. NM_140323.2 → NP_648580.1  uncharacterized protein Dmel_CG10681, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_648580.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VTY4
    UniProtKB/TrEMBL
    M9PFF6
    Related
    FBpp0075689
    Conserved Domains (1) summary
    pfam10241
    Location:36 → 114
    KxDL; Uncharacterized conserved protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
M9PFF6 M9PFF6
Q9VTY4.1 Q9VTY4

Gene LinkOut

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