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CG32104 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 39413, updated on 4-Jan-2025

Summary

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Official Symbol
CG32104provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0052104
Locus tag
Dmel_CG32104
See related
AllianceGenome:FB:FBgn0052104
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-69Ag; CG14123; CG14124; Dmel\CG32104
Summary
Predicted to be involved in transcription by RNA polymerase II. Predicted to be located in cytoplasm. Orthologous to human RPAP1 (RNA polymerase II associated protein 1). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See CG32104 in Genome Data Viewer
Location:
69B4-69B4; 3-38 cM
Exon count:
13
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (12393804..12399322, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (12386904..12392422, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Corazonin receptor Neighboring gene sodium chloride cotransporter 69 Neighboring gene long non-coding RNA:CR45824 Neighboring gene Odorant-binding protein 69a Neighboring gene SET and MYND domain containing, class 4, member 2 Neighboring gene Short Calcium-binding Mitochondrial Carrier

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Combining mapping and arraying: An approach to candidate gene identification. Wayne ML, et al. Proc Natl Acad Sci U S A, 2002 Nov 12. PMID 12415114, Free PMC Article
  2. The impact of genome variation and diet on the metabolic phenotype and microbiome composition of Drosophila melanogaster. Jehrke L, et al. Sci Rep, 2018 Apr 18. PMID 29670218, Free PMC Article
  3. Latitudinal clines in gene expression and cis-regulatory element variation in Drosophila melanogaster. Juneja P, et al. BMC Genomics, 2016 Nov 28. PMID 27894253, Free PMC Article
  4. Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes. Phanse S, et al. Data Brief, 2016 Mar. PMID 26870755, Free PMC Article
  5. Transient junction anisotropies orient annular cell polarization in the Drosophila airway tubes. Hosono C, et al. Nat Cell Biol, 2015 Dec. PMID 26551273

See all (26) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
  
involved_in transcription by RNA polymerase II ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG32104-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    12393804..12399322 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_140316.3 → NP_648573.2  uncharacterized protein Dmel_CG32104 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_648573.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    C8VUZ8, Q9VTX1
    Related
    FBpp0075718
    Conserved Domains (2) summary
    pfam08620
    Location:319 → 390
    RPAP1_C; RPAP1-like, C-terminal
    pfam08621
    Location:193 → 234
    RPAP1_N; RPAP1-like, N-terminal
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9NHD0 Q9NHD0
Q9VTX1 Q9VTX1

Gene LinkOut

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