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rps26l ribosomal protein S26, like [ Danio rerio (zebrafish) ]

Gene ID: 393715, updated on 4-Jan-2025

Summary

Official Symbol
rps26lprovided by ZNC
Official Full Name
ribosomal protein S26, likeprovided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-1706
See related
Ensembl:ENSDARG00000030408 AllianceGenome:ZFIN:ZDB-GENE-040426-1706
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:73182
Summary
Predicted to enable mRNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of cytosolic small ribosomal subunit. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 10. Orthologous to several human genes including RPS26 (ribosomal protein S26). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See rps26l in Genome Data Viewer
Location:
chromosome: 6
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 6 NC_007117.7 (49520705..49526067, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 6 NC_007117.6 (49522052..49527414, complement)

Chromosome 6 - NC_007117.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137495934 Neighboring gene ribosomal protein, large P2 Neighboring gene protein phosphatase 4, regulatory subunit 1-like Neighboring gene RAB22A, member RAS oncogene family

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Clone Names

  • MGC73182

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables mRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
ribosomal protein S26, like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_200742.1NP_957036.1  ribosomal protein S26, like

    See identical proteins and their annotated locations for NP_957036.1

    Status: PROVISIONAL

    Source sequence(s)
    BC059532
    UniProtKB/TrEMBL
    Q6PBZ2
    Related
    ENSDARP00000111782.1, ENSDART00000128025.4
    Conserved Domains (1) summary
    pfam01283
    Location:1101
    Ribosomal_S26e; Ribosomal protein S26e

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007117.7 Reference GRCz11 Primary Assembly

    Range
    49520705..49526067 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)