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CG43896 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 39360, updated on 4-Jan-2025

Summary

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Official Symbol
CG43896provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0264488
Locus tag
Dmel_CG43896
See related
AllianceGenome:FB:FBgn0264488
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG17824; CG6947; Dmel\CG43896
Old locus tag
Dmel_CG17824; Dmel_CG6947
Summary
Predicted to enable chitin binding activity. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See CG43896 in Genome Data Viewer
Location:
68E4-68E4; 3-37 cM
Exon count:
11
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (11976111..11983764)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (11969211..11976864)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene viral IAP-associated factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Drosophila genetic screen for suppressors of S6kinase-dependent growth identifies the F-box subunit Archipelago/FBXW7. Zahoor MK, et al. Mol Genet Genomics, 2019 Jun. PMID 30656413
  2. Genome-wide genetic screen identified the link between dG9a and epidermal growth factor receptor signaling pathway in vivo. Shimaji K, et al. Exp Cell Res, 2016 Aug 1. PMID 27343629
  3. Genetic basis and repeatability for desiccation resistance in Drosophila melanogaster (Diptera: Drosophilidae). Fanara JJ, et al. Genetica, 2024 Feb. PMID 38102503
  4. Genomic analysis of adaptive differentiation in Drosophila melanogaster. Turner TL, et al. Genetics, 2008 May. PMID 18493064, Free PMC Article
  5. Drosophila muller f elements maintain a distinct set of genomic properties over 40 million years of evolution. Leung W, et al. G3 (Bethesda), 2015 Mar 4. PMID 25740935, Free PMC Article

See all (24) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables chitin binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG43896-PB
CG43896-PC
CG43896-PD

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    11976111..11983764
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001300111.1 → NP_001287040.1  uncharacterized protein Dmel_CG43896, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001287040.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9PF73
    Conserved Domains (2) summary
    smart00494
    Location:488 → 535
    ChtBD2; Chitin-binding domain type 2
    pfam01607
    Location:153 → 206
    CBM_14; Chitin binding Peritrophin-A domain

  2. NM_001274803.1 → NP_001261732.1  uncharacterized protein Dmel_CG43896, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001261732.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9PF73
    Conserved Domains (2) summary
    smart00494
    Location:488 → 535
    ChtBD2; Chitin-binding domain type 2
    pfam01607
    Location:153 → 206
    CBM_14; Chitin binding Peritrophin-A domain

  3. NM_140276.3 → NP_648533.3  uncharacterized protein Dmel_CG43896, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_648533.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8SYK2, Q9VTR8
    Related
    FBpp0305039
    Conserved Domains (2) summary
    smart00494
    Location:488 → 535
    ChtBD2; Chitin-binding domain type 2
    pfam01607
    Location:153 → 206
    CBM_14; Chitin binding Peritrophin-A domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
M9PF73 M9PF73
Q8SYK2 Q8SYK2
Q9VTR8 Q9VTR8

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